Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Lhx1P63006 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx1P63006 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx1P63006 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx1P63006 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx1P63006 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx1P63006 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx1P63006 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Lhx1P63006 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx1P63006 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.15■□□□□ 0.18
Lhx1P63006 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx1P63006 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx1P63006 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx1P63006 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx1P63006 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lhx1P63006 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.18
Lhx1P63006 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.14■□□□□ 0.17
Lhx1P63006 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lhx1P63006 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Lhx1P63006 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lhx1P63006 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Lhx1P63006 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lhx1P63006 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lhx1P63006 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lhx1P63006 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.14■□□□□ 0.17
Lhx1P63006 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Lhx1P63006 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Lhx1P63006 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.14■□□□□ 0.17
Lhx1P63006 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.14■□□□□ 0.17
Lhx1P63006 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lhx1P63006 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lhx1P63006 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Lhx1P63006 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Lhx1P63006 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lhx1P63006 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lhx1P63006 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lhx1P63006 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.14■□□□□ 0.17
Lhx1P63006 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lhx1P63006 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lhx1P63006 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lhx1P63006 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lhx1P63006 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lhx1P63006 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lhx1P63006 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lhx1P63006 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lhx1P63006 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lhx1P63006 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lhx1P63006 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.13■□□□□ 0.17
Lhx1P63006 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lhx1P63006 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lhx1P63006 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lhx1P63006 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lhx1P63006 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.13■□□□□ 0.17
Lhx1P63006 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.13■□□□□ 0.17
Lhx1P63006 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.13■□□□□ 0.17
Lhx1P63006 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.13■□□□□ 0.17
Lhx1P63006 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.13■□□□□ 0.17
Lhx1P63006 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lhx1P63006 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lhx1P63006 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lhx1P63006 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Lhx1P63006 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lhx1P63006 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lhx1P63006 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lhx1P63006 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.13■□□□□ 0.17
Lhx1P63006 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lhx1P63006 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lhx1P63006 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lhx1P63006 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.12■□□□□ 0.17
Lhx1P63006 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
Lhx1P63006 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lhx1P63006 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Lhx1P63006 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Lhx1P63006 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lhx1P63006 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Lhx1P63006 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lhx1P63006 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lhx1P63006 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.12■□□□□ 0.17
Lhx1P63006 Gm36967-201ENSMUST00000193814 266 ntBASIC16.12■□□□□ 0.17
Lhx1P63006 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lhx1P63006 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.12■□□□□ 0.17
Lhx1P63006 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lhx1P63006 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lhx1P63006 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lhx1P63006 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lhx1P63006 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lhx1P63006 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lhx1P63006 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lhx1P63006 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Lhx1P63006 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.12■□□□□ 0.17
Lhx1P63006 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lhx1P63006 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lhx1P63006 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lhx1P63006 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lhx1P63006 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Lhx1P63006 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lhx1P63006 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lhx1P63006 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.11■□□□□ 0.17
Lhx1P63006 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.11■□□□□ 0.17
Lhx1P63006 Gm15372-201ENSMUST00000120729 834 ntBASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms