Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Rps28P62858 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Rps28P62858 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rps28P62858 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
Rps28P62858 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Rps28P62858 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Rps28P62858 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rps28P62858 Gm29340-201ENSMUST00000188763 3854 ntBASIC9.81□□□□□ -0.84
Rps28P62858 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rps28P62858 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rps28P62858 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Rps28P62858 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Rps28P62858 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rps28P62858 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rps28P62858 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC9.81□□□□□ -0.84
Rps28P62858 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Rps28P62858 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rps28P62858 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Rps28P62858 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rps28P62858 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rps28P62858 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rps28P62858 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rps28P62858 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rps28P62858 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC9.81□□□□□ -0.84
Rps28P62858 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rps28P62858 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC9.81□□□□□ -0.84
Rps28P62858 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rps28P62858 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rps28P62858 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Rps28P62858 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC9.81□□□□□ -0.84
Rps28P62858 Gm32699-201ENSMUST00000221728 1988 ntBASIC9.81□□□□□ -0.84
Rps28P62858 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Rps28P62858 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rps28P62858 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rps28P62858 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rps28P62858 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC9.8□□□□□ -0.84
Rps28P62858 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Rps28P62858 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Rps28P62858 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Rps28P62858 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rps28P62858 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC9.8□□□□□ -0.84
Rps28P62858 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rps28P62858 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Rps28P62858 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rps28P62858 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rps28P62858 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rps28P62858 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rps28P62858 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC9.8□□□□□ -0.84
Rps28P62858 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
Rps28P62858 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Rps28P62858 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rps28P62858 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rps28P62858 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rps28P62858 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC9.8□□□□□ -0.84
Rps28P62858 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rps28P62858 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rps28P62858 Gm44241-201ENSMUST00000203230 1662 ntBASIC9.8□□□□□ -0.84
Rps28P62858 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rps28P62858 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rps28P62858 Peli2-204ENSMUST00000226513 1320 ntBASIC9.8□□□□□ -0.84
Rps28P62858 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Rps28P62858 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rps28P62858 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rps28P62858 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rps28P62858 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rps28P62858 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rps28P62858 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rps28P62858 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rps28P62858 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rps28P62858 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rps28P62858 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rps28P62858 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC9.79□□□□□ -0.84
Rps28P62858 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Rps28P62858 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rps28P62858 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rps28P62858 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC9.79□□□□□ -0.84
Rps28P62858 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rps28P62858 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Rps28P62858 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rps28P62858 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Rps28P62858 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Rps28P62858 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rps28P62858 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rps28P62858 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC9.79□□□□□ -0.84
Rps28P62858 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rps28P62858 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rps28P62858 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rps28P62858 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rps28P62858 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rps28P62858 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rps28P62858 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rps28P62858 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rps28P62858 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Rps28P62858 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rps28P62858 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rps28P62858 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rps28P62858 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Rps28P62858 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rps28P62858 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rps28P62858 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms