Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Tubgcp3P58854 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tubgcp3P58854 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Tubgcp3P58854 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tubgcp3P58854 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tubgcp3P58854 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Tubgcp3P58854 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Tubgcp3P58854 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Tubgcp3P58854 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tubgcp3P58854 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.81■□□□□ 0.28
Tubgcp3P58854 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.81■□□□□ 0.28
Tubgcp3P58854 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Tubgcp3P58854 Mir6982-201ENSMUST00000184354 68 ntBASIC16.81■□□□□ 0.28
Tubgcp3P58854 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.81■□□□□ 0.28
Tubgcp3P58854 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Tubgcp3P58854 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tubgcp3P58854 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tubgcp3P58854 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Tubgcp3P58854 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Tubgcp3P58854 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tubgcp3P58854 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Tubgcp3P58854 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tubgcp3P58854 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tubgcp3P58854 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tubgcp3P58854 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tubgcp3P58854 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tubgcp3P58854 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tubgcp3P58854 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tubgcp3P58854 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Tubgcp3P58854 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tubgcp3P58854 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tubgcp3P58854 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tubgcp3P58854 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tubgcp3P58854 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tubgcp3P58854 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Tubgcp3P58854 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.8■□□□□ 0.28
Tubgcp3P58854 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.8■□□□□ 0.28
Tubgcp3P58854 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tubgcp3P58854 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tubgcp3P58854 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tubgcp3P58854 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tubgcp3P58854 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tubgcp3P58854 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Tubgcp3P58854 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tubgcp3P58854 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tubgcp3P58854 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Tubgcp3P58854 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.79■□□□□ 0.28
Tubgcp3P58854 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.79■□□□□ 0.28
Tubgcp3P58854 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tubgcp3P58854 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tubgcp3P58854 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Tubgcp3P58854 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tubgcp3P58854 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tubgcp3P58854 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Tubgcp3P58854 Mir5130-201ENSMUST00000175160 84 ntBASIC16.79■□□□□ 0.28
Tubgcp3P58854 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.79■□□□□ 0.28
Tubgcp3P58854 Gm10566-201ENSMUST00000086739 996 ntBASIC16.79■□□□□ 0.28
Tubgcp3P58854 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.79■□□□□ 0.28
Tubgcp3P58854 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tubgcp3P58854 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tubgcp3P58854 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tubgcp3P58854 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tubgcp3P58854 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tubgcp3P58854 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Tubgcp3P58854 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.79■□□□□ 0.28
Tubgcp3P58854 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tubgcp3P58854 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tubgcp3P58854 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Tubgcp3P58854 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
Tubgcp3P58854 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tubgcp3P58854 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Tubgcp3P58854 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Tubgcp3P58854 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tubgcp3P58854 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Tubgcp3P58854 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tubgcp3P58854 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tubgcp3P58854 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
Tubgcp3P58854 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tubgcp3P58854 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tubgcp3P58854 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tubgcp3P58854 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tubgcp3P58854 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Tubgcp3P58854 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Tubgcp3P58854 Gm18115-201ENSMUST00000221209 621 ntBASIC16.78■□□□□ 0.28
Tubgcp3P58854 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.78■□□□□ 0.28
Tubgcp3P58854 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tubgcp3P58854 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tubgcp3P58854 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tubgcp3P58854 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Tubgcp3P58854 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Tubgcp3P58854 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tubgcp3P58854 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Tubgcp3P58854 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.78■□□□□ 0.28
Tubgcp3P58854 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tubgcp3P58854 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Tubgcp3P58854 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Tubgcp3P58854 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tubgcp3P58854 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tubgcp3P58854 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tubgcp3P58854 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms