Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Tpm1P58771 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Tpm1P58771 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Tpm1P58771 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Tpm1P58771 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tpm1P58771 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC18.41■□□□□ 0.54
Tpm1P58771 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Tpm1P58771 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tpm1P58771 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tpm1P58771 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tpm1P58771 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC18.41■□□□□ 0.54
Tpm1P58771 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tpm1P58771 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tpm1P58771 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tpm1P58771 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Tpm1P58771 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.4■□□□□ 0.54
Tpm1P58771 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tpm1P58771 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tpm1P58771 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Tpm1P58771 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tpm1P58771 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tpm1P58771 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tpm1P58771 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.4■□□□□ 0.54
Tpm1P58771 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tpm1P58771 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Tpm1P58771 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.4■□□□□ 0.54
Tpm1P58771 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Tpm1P58771 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Tpm1P58771 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.4■□□□□ 0.54
Tpm1P58771 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tpm1P58771 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.4■□□□□ 0.54
Tpm1P58771 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tpm1P58771 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC18.4■□□□□ 0.54
Tpm1P58771 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tpm1P58771 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tpm1P58771 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC18.4■□□□□ 0.54
Tpm1P58771 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tpm1P58771 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tpm1P58771 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tpm1P58771 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Tpm1P58771 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tpm1P58771 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Tpm1P58771 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Tpm1P58771 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tpm1P58771 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tpm1P58771 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tpm1P58771 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tpm1P58771 Gm24841-201ENSMUST00000158676 357 ntBASIC18.39■□□□□ 0.53
Tpm1P58771 Gm10517-202ENSMUST00000192970 758 ntBASIC18.39■□□□□ 0.53
Tpm1P58771 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.39■□□□□ 0.53
Tpm1P58771 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.39■□□□□ 0.53
Tpm1P58771 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.39■□□□□ 0.53
Tpm1P58771 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tpm1P58771 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tpm1P58771 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tpm1P58771 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Tpm1P58771 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Tpm1P58771 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tpm1P58771 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tpm1P58771 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Tpm1P58771 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tpm1P58771 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.39■□□□□ 0.53
Tpm1P58771 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
Tpm1P58771 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tpm1P58771 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tpm1P58771 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
Tpm1P58771 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tpm1P58771 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tpm1P58771 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tpm1P58771 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tpm1P58771 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Tpm1P58771 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tpm1P58771 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tpm1P58771 Gm37812-201ENSMUST00000195216 2475 ntBASIC18.38■□□□□ 0.53
Tpm1P58771 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tpm1P58771 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tpm1P58771 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tpm1P58771 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tpm1P58771 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
Tpm1P58771 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tpm1P58771 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tpm1P58771 AC153526.5-201ENSMUST00000218661 2147 ntBASIC18.38■□□□□ 0.53
Tpm1P58771 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tpm1P58771 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tpm1P58771 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tpm1P58771 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC18.38■□□□□ 0.53
Tpm1P58771 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tpm1P58771 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tpm1P58771 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tpm1P58771 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tpm1P58771 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tpm1P58771 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tpm1P58771 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tpm1P58771 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Tpm1P58771 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC18.37■□□□□ 0.53
Tpm1P58771 AC093043.3-201ENSMUST00000226531 2273 ntBASIC18.37■□□□□ 0.53
Tpm1P58771 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tpm1P58771 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Tpm1P58771 Gm37025-201ENSMUST00000195159 829 ntBASIC18.37■□□□□ 0.53
Tpm1P58771 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms