Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh11P55288 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh11P55288 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh11P55288 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh11P55288 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC15.03■□□□□ -0
Cdh11P55288 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC15.03■□□□□ -0
Cdh11P55288 Gm10231-201ENSMUST00000181584 441 ntBASIC15.03■□□□□ -0
Cdh11P55288 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh11P55288 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh11P55288 Gm10175-202ENSMUST00000208752 441 ntBASIC15.03■□□□□ -0
Cdh11P55288 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh11P55288 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh11P55288 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh11P55288 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh11P55288 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh11P55288 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh11P55288 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh11P55288 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cdh11P55288 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh11P55288 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh11P55288 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh11P55288 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh11P55288 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh11P55288 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh11P55288 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh11P55288 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC15.03■□□□□ -0
Cdh11P55288 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh11P55288 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdh11P55288 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Cdh11P55288 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cdh11P55288 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Cdh11P55288 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Cdh11P55288 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Cdh11P55288 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cdh11P55288 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Cdh11P55288 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cdh11P55288 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Cdh11P55288 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.02■□□□□ -0
Cdh11P55288 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cdh11P55288 Gm4974-201ENSMUST00000209974 875 ntBASIC15.02■□□□□ -0
Cdh11P55288 AC159205.6-201ENSMUST00000224935 887 ntBASIC15.02■□□□□ -0
Cdh11P55288 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdh11P55288 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdh11P55288 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
Cdh11P55288 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdh11P55288 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.02□□□□□ -0.01
Cdh11P55288 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdh11P55288 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Cdh11P55288 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdh11P55288 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdh11P55288 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdh11P55288 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdh11P55288 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Cdh11P55288 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdh11P55288 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdh11P55288 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdh11P55288 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdh11P55288 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
Cdh11P55288 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdh11P55288 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Cdh11P55288 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh11P55288 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh11P55288 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh11P55288 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh11P55288 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh11P55288 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh11P55288 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh11P55288 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh11P55288 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh11P55288 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh11P55288 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Cdh11P55288 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh11P55288 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh11P55288 Gm27463-201ENSMUST00000183569 57 ntBASIC15.01□□□□□ -0.01
Cdh11P55288 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh11P55288 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh11P55288 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Cdh11P55288 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh11P55288 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh11P55288 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh11P55288 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh11P55288 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh11P55288 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdh11P55288 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.01□□□□□ -0.01
Cdh11P55288 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cdh11P55288 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Cdh11P55288 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Cdh11P55288 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cdh11P55288 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cdh11P55288 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cdh11P55288 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Cdh11P55288 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdh11P55288 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cdh11P55288 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cdh11P55288 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdh11P55288 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdh11P55288 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdh11P55288 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Cdh11P55288 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cdh11P55288 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms