Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Abcd3P55096 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.73□□□□□ -0.05
Abcd3P55096 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Abcd3P55096 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.73□□□□□ -0.05
Abcd3P55096 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Abcd3P55096 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Abcd3P55096 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Abcd3P55096 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Abcd3P55096 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Abcd3P55096 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Abcd3P55096 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Abcd3P55096 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Abcd3P55096 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Abcd3P55096 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Abcd3P55096 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Abcd3P55096 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Abcd3P55096 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Abcd3P55096 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Abcd3P55096 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Abcd3P55096 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.72□□□□□ -0.05
Abcd3P55096 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Abcd3P55096 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Abcd3P55096 Gm11336-201ENSMUST00000118168 334 ntBASIC14.72□□□□□ -0.05
Abcd3P55096 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Abcd3P55096 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.72□□□□□ -0.05
Abcd3P55096 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.72□□□□□ -0.05
Abcd3P55096 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Abcd3P55096 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Abcd3P55096 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Abcd3P55096 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
Abcd3P55096 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Abcd3P55096 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Abcd3P55096 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Abcd3P55096 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Abcd3P55096 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Abcd3P55096 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Abcd3P55096 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Abcd3P55096 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.72□□□□□ -0.05
Abcd3P55096 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Abcd3P55096 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Abcd3P55096 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Abcd3P55096 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Abcd3P55096 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Abcd3P55096 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Abcd3P55096 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Abcd3P55096 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Abcd3P55096 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Abcd3P55096 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Abcd3P55096 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.71□□□□□ -0.05
Abcd3P55096 Gm26039-201ENSMUST00000158152 144 ntBASIC14.71□□□□□ -0.05
Abcd3P55096 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC14.71□□□□□ -0.05
Abcd3P55096 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Abcd3P55096 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Abcd3P55096 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Abcd3P55096 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Abcd3P55096 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Abcd3P55096 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
Abcd3P55096 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Abcd3P55096 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Abcd3P55096 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Abcd3P55096 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.7□□□□□ -0.06
Abcd3P55096 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Abcd3P55096 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Abcd3P55096 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Abcd3P55096 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Abcd3P55096 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Abcd3P55096 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.7□□□□□ -0.06
Abcd3P55096 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC14.7□□□□□ -0.06
Abcd3P55096 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Abcd3P55096 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Abcd3P55096 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.7□□□□□ -0.06
Abcd3P55096 AC153881.2-201ENSMUST00000214877 204 ntBASIC14.7□□□□□ -0.06
Abcd3P55096 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Abcd3P55096 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Abcd3P55096 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Abcd3P55096 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Abcd3P55096 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.7□□□□□ -0.06
Abcd3P55096 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Abcd3P55096 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Abcd3P55096 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Abcd3P55096 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Abcd3P55096 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Abcd3P55096 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.7□□□□□ -0.06
Abcd3P55096 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.7□□□□□ -0.06
Abcd3P55096 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Abcd3P55096 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Abcd3P55096 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Abcd3P55096 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Abcd3P55096 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.69□□□□□ -0.06
Abcd3P55096 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Abcd3P55096 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Abcd3P55096 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Abcd3P55096 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.69□□□□□ -0.06
Abcd3P55096 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Abcd3P55096 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Abcd3P55096 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Abcd3P55096 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Abcd3P55096 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Abcd3P55096 Gm29707-201ENSMUST00000196325 491 ntBASIC14.69□□□□□ -0.06
Abcd3P55096 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms