Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx6P54823 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.7■□□□□ 0.26
Ddx6P54823 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx6P54823 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx6P54823 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx6P54823 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Ddx6P54823 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx6P54823 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Ddx6P54823 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx6P54823 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx6P54823 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Ddx6P54823 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx6P54823 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Ddx6P54823 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx6P54823 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx6P54823 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx6P54823 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx6P54823 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Ddx6P54823 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx6P54823 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx6P54823 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx6P54823 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx6P54823 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx6P54823 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx6P54823 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx6P54823 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.69■□□□□ 0.26
Ddx6P54823 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx6P54823 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx6P54823 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx6P54823 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Ddx6P54823 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx6P54823 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.68■□□□□ 0.26
Ddx6P54823 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx6P54823 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx6P54823 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Ddx6P54823 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx6P54823 Gm12497-201ENSMUST00000138778 237 ntBASIC16.68■□□□□ 0.26
Ddx6P54823 Gm10060-201ENSMUST00000212002 111 ntBASIC16.68■□□□□ 0.26
Ddx6P54823 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.68■□□□□ 0.26
Ddx6P54823 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx6P54823 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx6P54823 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx6P54823 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Ddx6P54823 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Ddx6P54823 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx6P54823 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx6P54823 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx6P54823 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx6P54823 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx6P54823 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx6P54823 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx6P54823 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx6P54823 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx6P54823 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Ddx6P54823 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx6P54823 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.67■□□□□ 0.26
Ddx6P54823 AW822252-206ENSMUST00000208904 237 ntBASIC16.67■□□□□ 0.26
Ddx6P54823 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx6P54823 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Ddx6P54823 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx6P54823 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx6P54823 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx6P54823 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx6P54823 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Ddx6P54823 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx6P54823 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx6P54823 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ddx6P54823 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx6P54823 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Ddx6P54823 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.66■□□□□ 0.26
Ddx6P54823 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx6P54823 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.66■□□□□ 0.26
Ddx6P54823 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.66■□□□□ 0.26
Ddx6P54823 Gm4535-201ENSMUST00000182274 558 ntBASIC16.66■□□□□ 0.26
Ddx6P54823 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.66■□□□□ 0.26
Ddx6P54823 Gm9172-201ENSMUST00000212092 954 ntBASIC16.66■□□□□ 0.26
Ddx6P54823 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx6P54823 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx6P54823 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx6P54823 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx6P54823 Gm10355-201ENSMUST00000097146 517 ntBASIC16.66■□□□□ 0.26
Ddx6P54823 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.66■□□□□ 0.26
Ddx6P54823 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx6P54823 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx6P54823 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx6P54823 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Ddx6P54823 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ddx6P54823 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Ddx6P54823 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx6P54823 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Ddx6P54823 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx6P54823 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx6P54823 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx6P54823 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx6P54823 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx6P54823 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.65■□□□□ 0.26
Ddx6P54823 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.65■□□□□ 0.26
Ddx6P54823 Gm7506-201ENSMUST00000207758 815 ntBASIC16.65■□□□□ 0.26
Ddx6P54823 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.65■□□□□ 0.26
Ddx6P54823 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms