Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.31■□□□□ 0.2
Atxn1P54254 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Atxn1P54254 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Atxn1P54254 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Atxn1P54254 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Atxn1P54254 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Atxn1P54254 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Atxn1P54254 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Atxn1P54254 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Atxn1P54254 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Atxn1P54254 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atxn1P54254 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atxn1P54254 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atxn1P54254 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Atxn1P54254 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atxn1P54254 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Atxn1P54254 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atxn1P54254 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atxn1P54254 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Atxn1P54254 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Atxn1P54254 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Atxn1P54254 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Atxn1P54254 Gm11336-201ENSMUST00000118168 334 ntBASIC16.3■□□□□ 0.2
Atxn1P54254 Mir5126-201ENSMUST00000175513 77 ntBASIC16.3■□□□□ 0.2
Atxn1P54254 Gm8969-201ENSMUST00000199694 526 ntBASIC16.3■□□□□ 0.2
Atxn1P54254 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.3■□□□□ 0.2
Atxn1P54254 Gm5186-201ENSMUST00000218781 920 ntBASIC16.3■□□□□ 0.2
Atxn1P54254 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC16.3■□□□□ 0.2
Atxn1P54254 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atxn1P54254 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.3■□□□□ 0.2
Atxn1P54254 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atxn1P54254 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atxn1P54254 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atxn1P54254 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atxn1P54254 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Atxn1P54254 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atxn1P54254 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atxn1P54254 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.3■□□□□ 0.2
Atxn1P54254 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Atxn1P54254 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atxn1P54254 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atxn1P54254 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.29■□□□□ 0.2
Atxn1P54254 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Atxn1P54254 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atxn1P54254 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atxn1P54254 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.29■□□□□ 0.2
Atxn1P54254 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Atxn1P54254 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.29■□□□□ 0.2
Atxn1P54254 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Atxn1P54254 Gm24513-201ENSMUST00000174964 138 ntBASIC16.29■□□□□ 0.2
Atxn1P54254 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Atxn1P54254 Gm27397-201ENSMUST00000184997 107 ntBASIC16.29■□□□□ 0.2
Atxn1P54254 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atxn1P54254 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Atxn1P54254 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atxn1P54254 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Atxn1P54254 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.29■□□□□ 0.2
Atxn1P54254 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Atxn1P54254 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atxn1P54254 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Atxn1P54254 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Atxn1P54254 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Atxn1P54254 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.28■□□□□ 0.2
Atxn1P54254 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Atxn1P54254 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.28■□□□□ 0.2
Atxn1P54254 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Atxn1P54254 Gm14822-201ENSMUST00000122247 291 ntBASIC16.28■□□□□ 0.2
Atxn1P54254 Gm12260-201ENSMUST00000122447 411 ntBASIC16.28■□□□□ 0.2
Atxn1P54254 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Atxn1P54254 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.28■□□□□ 0.2
Atxn1P54254 Psmb5-202ENSMUST00000227257 622 ntBASIC16.28■□□□□ 0.2
Atxn1P54254 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Atxn1P54254 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Atxn1P54254 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Atxn1P54254 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Atxn1P54254 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
Atxn1P54254 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Atxn1P54254 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Atxn1P54254 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Atxn1P54254 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Atxn1P54254 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Atxn1P54254 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Atxn1P54254 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atxn1P54254 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atxn1P54254 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atxn1P54254 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atxn1P54254 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.27■□□□□ 0.2
Atxn1P54254 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Atxn1P54254 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atxn1P54254 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atxn1P54254 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atxn1P54254 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Atxn1P54254 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.27■□□□□ 0.2
Atxn1P54254 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atxn1P54254 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.27■□□□□ 0.2
Atxn1P54254 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
Atxn1P54254 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atxn1P54254 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atxn1P54254 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atxn1P54254 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms