Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sox3P53784 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sox3P53784 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Sox3P53784 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Sox3P53784 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.72■□□□□ 0.11
Sox3P53784 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Sox3P53784 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC15.72■□□□□ 0.11
Sox3P53784 Gm10566-201ENSMUST00000086739 996 ntBASIC15.72■□□□□ 0.11
Sox3P53784 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Sox3P53784 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Sox3P53784 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.72■□□□□ 0.11
Sox3P53784 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Sox3P53784 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Sox3P53784 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.72■□□□□ 0.11
Sox3P53784 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sox3P53784 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sox3P53784 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Sox3P53784 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sox3P53784 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sox3P53784 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC15.71■□□□□ 0.11
Sox3P53784 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
Sox3P53784 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sox3P53784 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sox3P53784 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.71■□□□□ 0.11
Sox3P53784 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
Sox3P53784 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sox3P53784 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sox3P53784 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sox3P53784 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sox3P53784 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sox3P53784 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sox3P53784 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.71■□□□□ 0.11
Sox3P53784 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.71■□□□□ 0.11
Sox3P53784 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sox3P53784 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sox3P53784 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sox3P53784 Gm37722-201ENSMUST00000193757 208 ntBASIC15.71■□□□□ 0.11
Sox3P53784 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.71■□□□□ 0.11
Sox3P53784 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sox3P53784 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.71■□□□□ 0.11
Sox3P53784 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sox3P53784 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Sox3P53784 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Sox3P53784 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Sox3P53784 Dancr-204ENSMUST00000132389 2347 ntBASIC15.71■□□□□ 0.1
Sox3P53784 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox3P53784 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox3P53784 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox3P53784 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox3P53784 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox3P53784 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Sox3P53784 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Sox3P53784 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Sox3P53784 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox3P53784 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sox3P53784 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Sox3P53784 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox3P53784 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox3P53784 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Sox3P53784 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.7■□□□□ 0.1
Sox3P53784 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox3P53784 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox3P53784 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox3P53784 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox3P53784 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Sox3P53784 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox3P53784 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox3P53784 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox3P53784 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sox3P53784 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox3P53784 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Sox3P53784 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Sox3P53784 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox3P53784 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox3P53784 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Sox3P53784 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox3P53784 Gm11452-201ENSMUST00000122376 690 ntBASIC15.69■□□□□ 0.1
Sox3P53784 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox3P53784 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.69■□□□□ 0.1
Sox3P53784 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sox3P53784 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox3P53784 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sox3P53784 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox3P53784 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox3P53784 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox3P53784 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox3P53784 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox3P53784 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sox3P53784 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox3P53784 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox3P53784 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox3P53784 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox3P53784 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sox3P53784 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox3P53784 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Sox3P53784 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Sox3P53784 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox3P53784 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.68■□□□□ 0.1
Sox3P53784 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox3P53784 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms