Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Pdx1P52946 Gm9013-201ENSMUST00000132939 882 ntBASIC16.29■□□□□ 0.2
Pdx1P52946 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Pdx1P52946 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.29■□□□□ 0.2
Pdx1P52946 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdx1P52946 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pdx1P52946 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pdx1P52946 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdx1P52946 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pdx1P52946 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Pdx1P52946 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdx1P52946 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdx1P52946 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdx1P52946 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Pdx1P52946 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pdx1P52946 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdx1P52946 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdx1P52946 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Pdx1P52946 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pdx1P52946 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdx1P52946 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.29■□□□□ 0.2
Pdx1P52946 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdx1P52946 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pdx1P52946 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pdx1P52946 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Pdx1P52946 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Pdx1P52946 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Pdx1P52946 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pdx1P52946 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pdx1P52946 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pdx1P52946 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pdx1P52946 AA414768-201ENSMUST00000121924 1257 ntBASIC16.28■□□□□ 0.2
Pdx1P52946 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.28■□□□□ 0.2
Pdx1P52946 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pdx1P52946 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.28■□□□□ 0.2
Pdx1P52946 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pdx1P52946 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pdx1P52946 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.28■□□□□ 0.2
Pdx1P52946 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pdx1P52946 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Pdx1P52946 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pdx1P52946 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pdx1P52946 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pdx1P52946 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pdx1P52946 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Pdx1P52946 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Pdx1P52946 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pdx1P52946 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Pdx1P52946 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pdx1P52946 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pdx1P52946 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pdx1P52946 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Pdx1P52946 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pdx1P52946 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pdx1P52946 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.27■□□□□ 0.2
Pdx1P52946 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pdx1P52946 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pdx1P52946 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pdx1P52946 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.27■□□□□ 0.2
Pdx1P52946 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pdx1P52946 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pdx1P52946 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.27■□□□□ 0.2
Pdx1P52946 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.27■□□□□ 0.2
Pdx1P52946 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pdx1P52946 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.27■□□□□ 0.19
Pdx1P52946 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pdx1P52946 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Pdx1P52946 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pdx1P52946 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pdx1P52946 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pdx1P52946 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pdx1P52946 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pdx1P52946 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.26■□□□□ 0.19
Pdx1P52946 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.26■□□□□ 0.19
Pdx1P52946 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pdx1P52946 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.26■□□□□ 0.19
Pdx1P52946 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.26■□□□□ 0.19
Pdx1P52946 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pdx1P52946 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pdx1P52946 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Pdx1P52946 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pdx1P52946 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.26■□□□□ 0.19
Pdx1P52946 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Pdx1P52946 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pdx1P52946 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Pdx1P52946 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
Pdx1P52946 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pdx1P52946 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Pdx1P52946 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pdx1P52946 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pdx1P52946 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pdx1P52946 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pdx1P52946 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pdx1P52946 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.25■□□□□ 0.19
Pdx1P52946 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pdx1P52946 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Pdx1P52946 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pdx1P52946 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.25■□□□□ 0.19
Pdx1P52946 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pdx1P52946 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms