Protein–RNA interactions for Protein: P51954

Nek1, Serine/threonine-protein kinase Nek1, mousemouse

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek1P51954 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nek1P51954 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC18.36■□□□□ 0.53
Nek1P51954 AA414768-201ENSMUST00000121924 1257 ntBASIC18.36■□□□□ 0.53
Nek1P51954 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Nek1P51954 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.36■□□□□ 0.53
Nek1P51954 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Nek1P51954 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Nek1P51954 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nek1P51954 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nek1P51954 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nek1P51954 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.35■□□□□ 0.53
Nek1P51954 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.35■□□□□ 0.53
Nek1P51954 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Nek1P51954 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nek1P51954 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nek1P51954 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nek1P51954 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nek1P51954 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Nek1P51954 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nek1P51954 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nek1P51954 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nek1P51954 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nek1P51954 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
Nek1P51954 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nek1P51954 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nek1P51954 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nek1P51954 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nek1P51954 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Nek1P51954 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nek1P51954 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nek1P51954 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nek1P51954 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nek1P51954 Gm27741-201ENSMUST00000185060 237 ntBASIC18.34■□□□□ 0.53
Nek1P51954 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.34■□□□□ 0.53
Nek1P51954 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nek1P51954 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nek1P51954 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nek1P51954 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nek1P51954 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nek1P51954 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nek1P51954 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC18.34■□□□□ 0.53
Nek1P51954 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nek1P51954 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC18.34■□□□□ 0.53
Nek1P51954 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nek1P51954 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nek1P51954 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nek1P51954 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nek1P51954 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nek1P51954 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nek1P51954 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nek1P51954 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nek1P51954 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
Nek1P51954 Gm45058-201ENSMUST00000205810 766 ntBASIC18.33■□□□□ 0.52
Nek1P51954 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nek1P51954 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nek1P51954 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nek1P51954 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC18.33■□□□□ 0.52
Nek1P51954 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nek1P51954 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nek1P51954 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC18.33■□□□□ 0.52
Nek1P51954 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nek1P51954 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Nek1P51954 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Nek1P51954 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Nek1P51954 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nek1P51954 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nek1P51954 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nek1P51954 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nek1P51954 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.32■□□□□ 0.52
Nek1P51954 Mir5130-201ENSMUST00000175160 84 ntBASIC18.32■□□□□ 0.52
Nek1P51954 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.32■□□□□ 0.52
Nek1P51954 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nek1P51954 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
Nek1P51954 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nek1P51954 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nek1P51954 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nek1P51954 AC115863.1-201ENSMUST00000214815 1813 ntBASIC18.32■□□□□ 0.52
Nek1P51954 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Nek1P51954 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.32■□□□□ 0.52
Nek1P51954 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nek1P51954 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nek1P51954 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nek1P51954 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nek1P51954 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nek1P51954 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nek1P51954 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nek1P51954 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nek1P51954 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nek1P51954 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nek1P51954 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Nek1P51954 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.31■□□□□ 0.52
Nek1P51954 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Nek1P51954 Gm33142-201ENSMUST00000193913 867 ntBASIC18.31■□□□□ 0.52
Nek1P51954 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nek1P51954 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Nek1P51954 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nek1P51954 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nek1P51954 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nek1P51954 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nek1P51954 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms