Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Brca1P48754 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC18.41■□□□□ 0.54
Brca1P48754 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
Brca1P48754 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC18.41■□□□□ 0.54
Brca1P48754 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Brca1P48754 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Brca1P48754 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
Brca1P48754 Gm8655-201ENSMUST00000221159 852 ntBASIC18.41■□□□□ 0.54
Brca1P48754 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Brca1P48754 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Brca1P48754 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Brca1P48754 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Brca1P48754 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.41■□□□□ 0.54
Brca1P48754 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Brca1P48754 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Brca1P48754 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Brca1P48754 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Brca1P48754 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Brca1P48754 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Brca1P48754 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC18.4■□□□□ 0.54
Brca1P48754 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC18.4■□□□□ 0.54
Brca1P48754 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Brca1P48754 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.4■□□□□ 0.54
Brca1P48754 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Brca1P48754 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Brca1P48754 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Brca1P48754 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Brca1P48754 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.4■□□□□ 0.54
Brca1P48754 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Brca1P48754 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Brca1P48754 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
Brca1P48754 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Brca1P48754 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Brca1P48754 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Brca1P48754 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Brca1P48754 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.39■□□□□ 0.53
Brca1P48754 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
Brca1P48754 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Brca1P48754 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC18.39■□□□□ 0.53
Brca1P48754 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Brca1P48754 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC18.39■□□□□ 0.53
Brca1P48754 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Brca1P48754 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Brca1P48754 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Brca1P48754 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Brca1P48754 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Brca1P48754 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Brca1P48754 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Brca1P48754 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Brca1P48754 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Brca1P48754 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Brca1P48754 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Brca1P48754 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC18.38■□□□□ 0.53
Brca1P48754 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC18.38■□□□□ 0.53
Brca1P48754 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Brca1P48754 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Brca1P48754 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Brca1P48754 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Brca1P48754 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC18.38■□□□□ 0.53
Brca1P48754 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Brca1P48754 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Brca1P48754 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Brca1P48754 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Brca1P48754 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Brca1P48754 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Brca1P48754 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Brca1P48754 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Brca1P48754 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Brca1P48754 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Brca1P48754 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Brca1P48754 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.37■□□□□ 0.53
Brca1P48754 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Brca1P48754 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Brca1P48754 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Brca1P48754 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Brca1P48754 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC18.37■□□□□ 0.53
Brca1P48754 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Brca1P48754 AC154572.2-201ENSMUST00000225105 997 ntBASIC18.37■□□□□ 0.53
Brca1P48754 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Brca1P48754 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Brca1P48754 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.37■□□□□ 0.53
Brca1P48754 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Brca1P48754 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Brca1P48754 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Brca1P48754 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.36■□□□□ 0.53
Brca1P48754 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Brca1P48754 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC18.36■□□□□ 0.53
Brca1P48754 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
Brca1P48754 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Brca1P48754 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Brca1P48754 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC18.36■□□□□ 0.53
Brca1P48754 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Brca1P48754 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Brca1P48754 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
Brca1P48754 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Brca1P48754 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Brca1P48754 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Brca1P48754 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC18.35■□□□□ 0.53
Brca1P48754 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Brca1P48754 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms