Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Col18a1P39061 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC21.88■■□□□ 1.09
Col18a1P39061 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC21.88■■□□□ 1.09
Col18a1P39061 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Col18a1P39061 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC21.88■■□□□ 1.09
Col18a1P39061 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Col18a1P39061 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC21.88■■□□□ 1.09
Col18a1P39061 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC21.88■■□□□ 1.09
Col18a1P39061 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Col18a1P39061 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Col18a1P39061 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Col18a1P39061 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Col18a1P39061 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Col18a1P39061 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Col18a1P39061 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Col18a1P39061 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col18a1P39061 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Col18a1P39061 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC21.87■■□□□ 1.09
Col18a1P39061 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Col18a1P39061 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC21.87■■□□□ 1.09
Col18a1P39061 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col18a1P39061 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Col18a1P39061 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC21.87■■□□□ 1.09
Col18a1P39061 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col18a1P39061 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col18a1P39061 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col18a1P39061 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col18a1P39061 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col18a1P39061 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col18a1P39061 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Col18a1P39061 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC21.87■■□□□ 1.09
Col18a1P39061 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC21.87■■□□□ 1.09
Col18a1P39061 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC21.87■■□□□ 1.09
Col18a1P39061 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Col18a1P39061 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Col18a1P39061 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Col18a1P39061 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Col18a1P39061 AC154767.3-201ENSMUST00000225150 1342 ntBASIC21.86■■□□□ 1.09
Col18a1P39061 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Col18a1P39061 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Col18a1P39061 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
Col18a1P39061 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC21.86■■□□□ 1.09
Col18a1P39061 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
Col18a1P39061 Gm43767-201ENSMUST00000198933 381 ntBASIC21.86■■□□□ 1.09
Col18a1P39061 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Col18a1P39061 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Col18a1P39061 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Col18a1P39061 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Col18a1P39061 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Col18a1P39061 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Col18a1P39061 Mir449b-201ENSMUST00000104833 80 ntBASIC21.85■■□□□ 1.09
Col18a1P39061 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC21.85■■□□□ 1.09
Col18a1P39061 Gm20553-201ENSMUST00000204205 844 ntBASIC21.85■■□□□ 1.09
Col18a1P39061 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Col18a1P39061 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Col18a1P39061 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Col18a1P39061 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Col18a1P39061 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Col18a1P39061 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Col18a1P39061 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Col18a1P39061 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Col18a1P39061 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Col18a1P39061 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Col18a1P39061 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Col18a1P39061 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC21.84■■□□□ 1.09
Col18a1P39061 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Col18a1P39061 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC21.84■■□□□ 1.09
Col18a1P39061 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC21.84■■□□□ 1.09
Col18a1P39061 Gm7787-201ENSMUST00000216858 688 ntBASIC21.84■■□□□ 1.09
Col18a1P39061 CT025626.1-201ENSMUST00000223735 1455 ntBASIC21.84■■□□□ 1.09
Col18a1P39061 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Col18a1P39061 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Col18a1P39061 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Col18a1P39061 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Col18a1P39061 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Col18a1P39061 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Col18a1P39061 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Col18a1P39061 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Col18a1P39061 Rprl2-201ENSMUST00000157150 290 ntBASIC21.84■■□□□ 1.09
Col18a1P39061 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC21.84■■□□□ 1.09
Col18a1P39061 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Col18a1P39061 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Col18a1P39061 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Col18a1P39061 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Col18a1P39061 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Col18a1P39061 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Col18a1P39061 Gm22065-201ENSMUST00000103753 110 ntBASIC21.83■■□□□ 1.09
Col18a1P39061 Gm22066-201ENSMUST00000103761 110 ntBASIC21.83■■□□□ 1.09
Col18a1P39061 Gm24932-201ENSMUST00000103763 110 ntBASIC21.83■■□□□ 1.09
Col18a1P39061 Gm24115-201ENSMUST00000103799 110 ntBASIC21.83■■□□□ 1.09
Col18a1P39061 Gm22190-201ENSMUST00000103827 110 ntBASIC21.83■■□□□ 1.09
Col18a1P39061 Gm22191-201ENSMUST00000103831 110 ntBASIC21.83■■□□□ 1.09
Col18a1P39061 Gm24721-201ENSMUST00000103849 110 ntBASIC21.83■■□□□ 1.09
Col18a1P39061 Gm28018-201ENSMUST00000103869 110 ntBASIC21.83■■□□□ 1.09
Col18a1P39061 Gm26399-201ENSMUST00000103937 110 ntBASIC21.83■■□□□ 1.09
Col18a1P39061 Gm6226-201ENSMUST00000117765 1146 ntBASIC21.83■■□□□ 1.09
Col18a1P39061 Gm18889-201ENSMUST00000174284 929 ntBASIC21.83■■□□□ 1.09
Col18a1P39061 Gm25349-201ENSMUST00000177728 110 ntBASIC21.83■■□□□ 1.09
Col18a1P39061 Gm23616-201ENSMUST00000177797 110 ntBASIC21.83■■□□□ 1.09
Col18a1P39061 Gm25871-201ENSMUST00000177816 110 ntBASIC21.83■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms