Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rfc1P35601 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfc1P35601 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Rfc1P35601 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Rfc1P35601 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfc1P35601 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Rfc1P35601 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfc1P35601 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rfc1P35601 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rfc1P35601 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rfc1P35601 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfc1P35601 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfc1P35601 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Rfc1P35601 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfc1P35601 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Rfc1P35601 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfc1P35601 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.39■□□□□ 0.37
Rfc1P35601 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfc1P35601 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.39■□□□□ 0.37
Rfc1P35601 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfc1P35601 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfc1P35601 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Rfc1P35601 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfc1P35601 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfc1P35601 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfc1P35601 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfc1P35601 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfc1P35601 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfc1P35601 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Rfc1P35601 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfc1P35601 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rfc1P35601 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Rfc1P35601 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rfc1P35601 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfc1P35601 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.38■□□□□ 0.37
Rfc1P35601 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rfc1P35601 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Rfc1P35601 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfc1P35601 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Rfc1P35601 Gm11927-201ENSMUST00000118472 759 ntBASIC17.38■□□□□ 0.37
Rfc1P35601 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.38■□□□□ 0.37
Rfc1P35601 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rfc1P35601 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rfc1P35601 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.38■□□□□ 0.37
Rfc1P35601 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfc1P35601 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfc1P35601 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Rfc1P35601 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
Rfc1P35601 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfc1P35601 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfc1P35601 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfc1P35601 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Rfc1P35601 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Rfc1P35601 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfc1P35601 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfc1P35601 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rfc1P35601 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfc1P35601 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfc1P35601 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfc1P35601 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfc1P35601 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfc1P35601 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfc1P35601 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfc1P35601 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Rfc1P35601 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfc1P35601 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rfc1P35601 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfc1P35601 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rfc1P35601 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Rfc1P35601 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rfc1P35601 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfc1P35601 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
Rfc1P35601 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Rfc1P35601 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Rfc1P35601 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Rfc1P35601 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfc1P35601 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Rfc1P35601 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfc1P35601 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Rfc1P35601 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rfc1P35601 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Rfc1P35601 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Rfc1P35601 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfc1P35601 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.36■□□□□ 0.37
Rfc1P35601 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfc1P35601 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfc1P35601 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfc1P35601 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.36■□□□□ 0.37
Rfc1P35601 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.36■□□□□ 0.37
Rfc1P35601 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.36■□□□□ 0.37
Rfc1P35601 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rfc1P35601 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.36■□□□□ 0.37
Rfc1P35601 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.36■□□□□ 0.37
Rfc1P35601 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfc1P35601 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.36■□□□□ 0.37
Rfc1P35601 Mtag2-201ENSMUST00000058665 714 ntBASIC17.36■□□□□ 0.37
Rfc1P35601 Gm4968-201ENSMUST00000071458 858 ntBASIC17.36■□□□□ 0.37
Rfc1P35601 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Rfc1P35601 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfc1P35601 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms