Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Slc6a1P31648 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Slc6a1P31648 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Slc6a1P31648 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Slc6a1P31648 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc6a1P31648 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.2□□□□□ -0.14
Slc6a1P31648 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc6a1P31648 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc6a1P31648 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc6a1P31648 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc6a1P31648 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Slc6a1P31648 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc6a1P31648 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc6a1P31648 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc6a1P31648 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Slc6a1P31648 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc6a1P31648 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc6a1P31648 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Slc6a1P31648 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Slc6a1P31648 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc6a1P31648 Gm37856-201ENSMUST00000191634 999 ntBASIC14.2□□□□□ -0.14
Slc6a1P31648 Gm44878-201ENSMUST00000205812 1295 ntBASIC14.2□□□□□ -0.14
Slc6a1P31648 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.2□□□□□ -0.14
Slc6a1P31648 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc6a1P31648 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc6a1P31648 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Slc6a1P31648 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc6a1P31648 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Slc6a1P31648 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Slc6a1P31648 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc6a1P31648 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc6a1P31648 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc6a1P31648 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc6a1P31648 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc6a1P31648 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc6a1P31648 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc6a1P31648 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc6a1P31648 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Slc6a1P31648 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc6a1P31648 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc6a1P31648 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Slc6a1P31648 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.19□□□□□ -0.14
Slc6a1P31648 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Slc6a1P31648 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.19□□□□□ -0.14
Slc6a1P31648 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc6a1P31648 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc6a1P31648 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc6a1P31648 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Slc6a1P31648 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Slc6a1P31648 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC14.19□□□□□ -0.14
Slc6a1P31648 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Slc6a1P31648 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc6a1P31648 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc6a1P31648 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc6a1P31648 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc6a1P31648 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Slc6a1P31648 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc6a1P31648 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc6a1P31648 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc6a1P31648 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Slc6a1P31648 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Slc6a1P31648 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Slc6a1P31648 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc6a1P31648 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc6a1P31648 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Slc6a1P31648 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc6a1P31648 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc6a1P31648 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Slc6a1P31648 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Slc6a1P31648 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc6a1P31648 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc6a1P31648 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Slc6a1P31648 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc6a1P31648 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC14.18□□□□□ -0.14
Slc6a1P31648 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc6a1P31648 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc6a1P31648 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Slc6a1P31648 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc6a1P31648 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Slc6a1P31648 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc6a1P31648 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc6a1P31648 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Slc6a1P31648 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Slc6a1P31648 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc6a1P31648 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc6a1P31648 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc6a1P31648 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Slc6a1P31648 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Slc6a1P31648 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc6a1P31648 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc6a1P31648 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc6a1P31648 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Slc6a1P31648 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.17□□□□□ -0.14
Slc6a1P31648 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc6a1P31648 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc6a1P31648 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc6a1P31648 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Slc6a1P31648 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Slc6a1P31648 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Slc6a1P31648 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms