Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vcam1P29533 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vcam1P29533 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Vcam1P29533 Mir5126-201ENSMUST00000175513 77 ntBASIC18.87■□□□□ 0.61
Vcam1P29533 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Vcam1P29533 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC18.87■□□□□ 0.61
Vcam1P29533 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC18.87■□□□□ 0.61
Vcam1P29533 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vcam1P29533 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Vcam1P29533 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vcam1P29533 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Vcam1P29533 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vcam1P29533 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Vcam1P29533 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vcam1P29533 Gm11780-201ENSMUST00000136880 516 ntBASIC18.86■□□□□ 0.61
Vcam1P29533 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Vcam1P29533 Gm7230-201ENSMUST00000173026 815 ntBASIC18.86■□□□□ 0.61
Vcam1P29533 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vcam1P29533 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC18.86■□□□□ 0.61
Vcam1P29533 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Vcam1P29533 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Vcam1P29533 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC18.86■□□□□ 0.61
Vcam1P29533 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Vcam1P29533 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vcam1P29533 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vcam1P29533 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vcam1P29533 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Vcam1P29533 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Vcam1P29533 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vcam1P29533 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vcam1P29533 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vcam1P29533 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vcam1P29533 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC18.85■□□□□ 0.61
Vcam1P29533 Mir6404-201ENSMUST00000183699 94 ntBASIC18.85■□□□□ 0.61
Vcam1P29533 Gm9172-201ENSMUST00000212092 954 ntBASIC18.85■□□□□ 0.61
Vcam1P29533 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC18.85■□□□□ 0.61
Vcam1P29533 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vcam1P29533 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vcam1P29533 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vcam1P29533 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Vcam1P29533 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vcam1P29533 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vcam1P29533 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vcam1P29533 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Vcam1P29533 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vcam1P29533 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Vcam1P29533 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vcam1P29533 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vcam1P29533 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC18.84■□□□□ 0.61
Vcam1P29533 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Vcam1P29533 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vcam1P29533 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vcam1P29533 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vcam1P29533 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Vcam1P29533 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.84■□□□□ 0.61
Vcam1P29533 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vcam1P29533 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.83■□□□□ 0.61
Vcam1P29533 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Vcam1P29533 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Vcam1P29533 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC18.83■□□□□ 0.61
Vcam1P29533 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Vcam1P29533 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Vcam1P29533 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC18.83■□□□□ 0.6
Vcam1P29533 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Vcam1P29533 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC18.83■□□□□ 0.6
Vcam1P29533 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Vcam1P29533 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC18.83■□□□□ 0.6
Vcam1P29533 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vcam1P29533 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Vcam1P29533 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vcam1P29533 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Vcam1P29533 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Vcam1P29533 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vcam1P29533 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.83■□□□□ 0.6
Vcam1P29533 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC18.83■□□□□ 0.6
Vcam1P29533 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vcam1P29533 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vcam1P29533 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Vcam1P29533 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
Vcam1P29533 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.82■□□□□ 0.6
Vcam1P29533 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vcam1P29533 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vcam1P29533 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vcam1P29533 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Vcam1P29533 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vcam1P29533 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC18.82■□□□□ 0.6
Vcam1P29533 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Vcam1P29533 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC18.82■□□□□ 0.6
Vcam1P29533 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC18.82■□□□□ 0.6
Vcam1P29533 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC18.82■□□□□ 0.6
Vcam1P29533 Gm6089-201ENSMUST00000197666 938 ntBASIC18.82■□□□□ 0.6
Vcam1P29533 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Vcam1P29533 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
Vcam1P29533 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vcam1P29533 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vcam1P29533 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vcam1P29533 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Vcam1P29533 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Vcam1P29533 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vcam1P29533 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms