Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RxrbP28704 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.56■□□□□ 0.24
RxrbP28704 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RxrbP28704 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RxrbP28704 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RxrbP28704 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RxrbP28704 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.56■□□□□ 0.24
RxrbP28704 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RxrbP28704 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RxrbP28704 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.56■□□□□ 0.24
RxrbP28704 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RxrbP28704 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RxrbP28704 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RxrbP28704 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RxrbP28704 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RxrbP28704 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RxrbP28704 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RxrbP28704 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.55■□□□□ 0.24
RxrbP28704 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
RxrbP28704 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RxrbP28704 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RxrbP28704 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.55■□□□□ 0.24
RxrbP28704 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.55■□□□□ 0.24
RxrbP28704 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
RxrbP28704 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RxrbP28704 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
RxrbP28704 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RxrbP28704 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.55■□□□□ 0.24
RxrbP28704 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RxrbP28704 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
RxrbP28704 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RxrbP28704 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RxrbP28704 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
RxrbP28704 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RxrbP28704 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RxrbP28704 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RxrbP28704 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RxrbP28704 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RxrbP28704 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.54■□□□□ 0.24
RxrbP28704 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RxrbP28704 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RxrbP28704 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RxrbP28704 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RxrbP28704 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RxrbP28704 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
RxrbP28704 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.54■□□□□ 0.24
RxrbP28704 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.54■□□□□ 0.24
RxrbP28704 Gm37856-201ENSMUST00000191634 999 ntBASIC16.54■□□□□ 0.24
RxrbP28704 Trmt13-210ENSMUST00000198454 880 ntBASIC16.54■□□□□ 0.24
RxrbP28704 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RxrbP28704 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RxrbP28704 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RxrbP28704 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.54■□□□□ 0.24
RxrbP28704 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RxrbP28704 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RxrbP28704 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RxrbP28704 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RxrbP28704 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RxrbP28704 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
RxrbP28704 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RxrbP28704 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RxrbP28704 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RxrbP28704 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.53■□□□□ 0.24
RxrbP28704 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RxrbP28704 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
RxrbP28704 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
RxrbP28704 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
RxrbP28704 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RxrbP28704 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.53■□□□□ 0.24
RxrbP28704 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RxrbP28704 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RxrbP28704 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RxrbP28704 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RxrbP28704 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RxrbP28704 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RxrbP28704 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RxrbP28704 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.53■□□□□ 0.24
RxrbP28704 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RxrbP28704 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RxrbP28704 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RxrbP28704 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.53■□□□□ 0.24
RxrbP28704 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RxrbP28704 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RxrbP28704 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RxrbP28704 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RxrbP28704 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
RxrbP28704 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
RxrbP28704 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RxrbP28704 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RxrbP28704 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RxrbP28704 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RxrbP28704 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.52■□□□□ 0.24
RxrbP28704 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RxrbP28704 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.52■□□□□ 0.24
RxrbP28704 Gm15378-201ENSMUST00000121894 207 ntBASIC16.52■□□□□ 0.24
RxrbP28704 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RxrbP28704 Gm10517-202ENSMUST00000192970 758 ntBASIC16.52■□□□□ 0.24
RxrbP28704 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RxrbP28704 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
RxrbP28704 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms