Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cd40P27512 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cd40P27512 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.9□□□□□ -0.02
Cd40P27512 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Cd40P27512 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cd40P27512 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.89□□□□□ -0.03
Cd40P27512 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cd40P27512 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.89□□□□□ -0.03
Cd40P27512 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cd40P27512 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.89□□□□□ -0.03
Cd40P27512 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cd40P27512 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cd40P27512 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cd40P27512 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Cd40P27512 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cd40P27512 Gm36967-201ENSMUST00000193814 266 ntBASIC14.89□□□□□ -0.03
Cd40P27512 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cd40P27512 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cd40P27512 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cd40P27512 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.89□□□□□ -0.03
Cd40P27512 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cd40P27512 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cd40P27512 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cd40P27512 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Cd40P27512 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cd40P27512 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cd40P27512 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cd40P27512 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cd40P27512 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cd40P27512 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.88□□□□□ -0.03
Cd40P27512 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cd40P27512 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.88□□□□□ -0.03
Cd40P27512 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cd40P27512 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Cd40P27512 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Cd40P27512 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cd40P27512 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cd40P27512 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cd40P27512 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Cd40P27512 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Cd40P27512 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cd40P27512 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cd40P27512 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cd40P27512 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cd40P27512 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cd40P27512 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cd40P27512 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cd40P27512 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cd40P27512 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cd40P27512 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cd40P27512 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cd40P27512 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cd40P27512 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cd40P27512 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cd40P27512 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cd40P27512 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cd40P27512 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cd40P27512 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Cd40P27512 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.87□□□□□ -0.03
Cd40P27512 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Cd40P27512 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cd40P27512 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cd40P27512 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cd40P27512 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cd40P27512 Gm11950-201ENSMUST00000121615 838 ntBASIC14.87□□□□□ -0.03
Cd40P27512 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.87□□□□□ -0.03
Cd40P27512 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cd40P27512 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cd40P27512 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cd40P27512 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cd40P27512 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cd40P27512 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cd40P27512 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cd40P27512 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cd40P27512 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cd40P27512 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cd40P27512 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cd40P27512 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cd40P27512 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cd40P27512 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cd40P27512 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cd40P27512 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cd40P27512 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cd40P27512 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cd40P27512 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Cd40P27512 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cd40P27512 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.86□□□□□ -0.03
Cd40P27512 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Cd40P27512 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Cd40P27512 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
Cd40P27512 Gm6345-202ENSMUST00000180900 204 ntBASIC14.86□□□□□ -0.03
Cd40P27512 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cd40P27512 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.86□□□□□ -0.03
Cd40P27512 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cd40P27512 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Cd40P27512 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cd40P27512 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cd40P27512 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cd40P27512 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Cd40P27512 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms