Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nfkb1P25799 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Nfkb1P25799 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nfkb1P25799 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Nfkb1P25799 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.89■□□□□ 0.29
Nfkb1P25799 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.89■□□□□ 0.29
Nfkb1P25799 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.89■□□□□ 0.29
Nfkb1P25799 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nfkb1P25799 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nfkb1P25799 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nfkb1P25799 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Nfkb1P25799 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Nfkb1P25799 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Nfkb1P25799 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nfkb1P25799 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Nfkb1P25799 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.89■□□□□ 0.29
Nfkb1P25799 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nfkb1P25799 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.89■□□□□ 0.29
Nfkb1P25799 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nfkb1P25799 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nfkb1P25799 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nfkb1P25799 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nfkb1P25799 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nfkb1P25799 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.88■□□□□ 0.29
Nfkb1P25799 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.88■□□□□ 0.29
Nfkb1P25799 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Nfkb1P25799 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nfkb1P25799 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.88■□□□□ 0.29
Nfkb1P25799 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nfkb1P25799 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nfkb1P25799 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nfkb1P25799 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nfkb1P25799 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.88■□□□□ 0.29
Nfkb1P25799 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.88■□□□□ 0.29
Nfkb1P25799 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nfkb1P25799 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nfkb1P25799 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nfkb1P25799 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nfkb1P25799 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nfkb1P25799 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nfkb1P25799 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nfkb1P25799 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nfkb1P25799 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nfkb1P25799 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nfkb1P25799 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nfkb1P25799 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nfkb1P25799 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.87■□□□□ 0.29
Nfkb1P25799 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nfkb1P25799 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nfkb1P25799 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Nfkb1P25799 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.87■□□□□ 0.29
Nfkb1P25799 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.87■□□□□ 0.29
Nfkb1P25799 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nfkb1P25799 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.87■□□□□ 0.29
Nfkb1P25799 Gm27459-201ENSMUST00000184860 107 ntBASIC16.87■□□□□ 0.29
Nfkb1P25799 Gm44430-201ENSMUST00000203376 995 ntBASIC16.87■□□□□ 0.29
Nfkb1P25799 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.87■□□□□ 0.29
Nfkb1P25799 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Nfkb1P25799 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nfkb1P25799 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nfkb1P25799 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nfkb1P25799 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nfkb1P25799 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nfkb1P25799 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Nfkb1P25799 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nfkb1P25799 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nfkb1P25799 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nfkb1P25799 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nfkb1P25799 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nfkb1P25799 Gm13312-201ENSMUST00000119631 718 ntBASIC16.86■□□□□ 0.29
Nfkb1P25799 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Nfkb1P25799 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Nfkb1P25799 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Nfkb1P25799 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
Nfkb1P25799 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nfkb1P25799 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Nfkb1P25799 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Nfkb1P25799 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nfkb1P25799 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nfkb1P25799 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nfkb1P25799 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Nfkb1P25799 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nfkb1P25799 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nfkb1P25799 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.85■□□□□ 0.29
Nfkb1P25799 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nfkb1P25799 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nfkb1P25799 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nfkb1P25799 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nfkb1P25799 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
Nfkb1P25799 Gm43347-201ENSMUST00000200226 580 ntBASIC16.85■□□□□ 0.29
Nfkb1P25799 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.85■□□□□ 0.29
Nfkb1P25799 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nfkb1P25799 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Nfkb1P25799 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nfkb1P25799 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nfkb1P25799 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nfkb1P25799 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nfkb1P25799 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nfkb1P25799 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.84■□□□□ 0.29
Nfkb1P25799 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms