Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col8a2P25318 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col8a2P25318 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col8a2P25318 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col8a2P25318 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col8a2P25318 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col8a2P25318 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col8a2P25318 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col8a2P25318 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col8a2P25318 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col8a2P25318 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col8a2P25318 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Col8a2P25318 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col8a2P25318 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col8a2P25318 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC13.72□□□□□ -0.21
Col8a2P25318 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col8a2P25318 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.72□□□□□ -0.21
Col8a2P25318 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Col8a2P25318 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Col8a2P25318 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC13.72□□□□□ -0.21
Col8a2P25318 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Col8a2P25318 AC125350.1-201ENSMUST00000225115 903 ntBASIC13.72□□□□□ -0.21
Col8a2P25318 AC124569.2-201ENSMUST00000225998 818 ntBASIC13.72□□□□□ -0.21
Col8a2P25318 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col8a2P25318 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col8a2P25318 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col8a2P25318 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col8a2P25318 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col8a2P25318 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col8a2P25318 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col8a2P25318 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col8a2P25318 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col8a2P25318 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col8a2P25318 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.72□□□□□ -0.21
Col8a2P25318 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col8a2P25318 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col8a2P25318 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col8a2P25318 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col8a2P25318 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col8a2P25318 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.21
Col8a2P25318 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Col8a2P25318 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Col8a2P25318 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col8a2P25318 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col8a2P25318 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col8a2P25318 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col8a2P25318 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC13.71□□□□□ -0.21
Col8a2P25318 Gm27357-201ENSMUST00000183754 135 ntBASIC13.71□□□□□ -0.21
Col8a2P25318 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC13.71□□□□□ -0.21
Col8a2P25318 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col8a2P25318 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col8a2P25318 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col8a2P25318 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col8a2P25318 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col8a2P25318 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col8a2P25318 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Col8a2P25318 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Col8a2P25318 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Col8a2P25318 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col8a2P25318 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col8a2P25318 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Col8a2P25318 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col8a2P25318 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col8a2P25318 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
Col8a2P25318 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col8a2P25318 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col8a2P25318 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col8a2P25318 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col8a2P25318 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col8a2P25318 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col8a2P25318 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col8a2P25318 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Col8a2P25318 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col8a2P25318 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Col8a2P25318 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC13.7□□□□□ -0.22
Col8a2P25318 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC13.7□□□□□ -0.22
Col8a2P25318 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col8a2P25318 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col8a2P25318 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC13.7□□□□□ -0.22
Col8a2P25318 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col8a2P25318 AC159205.3-201ENSMUST00000224614 874 ntBASIC13.7□□□□□ -0.22
Col8a2P25318 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Col8a2P25318 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC13.7□□□□□ -0.22
Col8a2P25318 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Col8a2P25318 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col8a2P25318 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC13.7□□□□□ -0.22
Col8a2P25318 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col8a2P25318 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col8a2P25318 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col8a2P25318 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col8a2P25318 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col8a2P25318 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col8a2P25318 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col8a2P25318 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Col8a2P25318 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col8a2P25318 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col8a2P25318 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Col8a2P25318 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Col8a2P25318 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Col8a2P25318 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms