Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Irf8P23611 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Irf8P23611 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Irf8P23611 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Irf8P23611 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Irf8P23611 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Irf8P23611 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Irf8P23611 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Irf8P23611 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Irf8P23611 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Irf8P23611 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.75■□□□□ 0.43
Irf8P23611 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Irf8P23611 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.75■□□□□ 0.43
Irf8P23611 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Irf8P23611 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Irf8P23611 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Irf8P23611 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Irf8P23611 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Irf8P23611 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Irf8P23611 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Irf8P23611 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Irf8P23611 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Irf8P23611 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Irf8P23611 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Irf8P23611 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Irf8P23611 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Irf8P23611 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Irf8P23611 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Irf8P23611 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Irf8P23611 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Irf8P23611 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Irf8P23611 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Irf8P23611 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Irf8P23611 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Irf8P23611 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Irf8P23611 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Irf8P23611 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Irf8P23611 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Irf8P23611 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Irf8P23611 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.74■□□□□ 0.43
Irf8P23611 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Irf8P23611 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Irf8P23611 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Irf8P23611 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Irf8P23611 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Irf8P23611 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Irf8P23611 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Irf8P23611 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Irf8P23611 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Irf8P23611 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Irf8P23611 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Irf8P23611 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Irf8P23611 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Irf8P23611 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.73■□□□□ 0.43
Irf8P23611 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Irf8P23611 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Irf8P23611 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Irf8P23611 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
Irf8P23611 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Irf8P23611 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Irf8P23611 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Irf8P23611 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.73■□□□□ 0.43
Irf8P23611 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Irf8P23611 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Irf8P23611 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Irf8P23611 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Irf8P23611 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Irf8P23611 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Irf8P23611 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Irf8P23611 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Irf8P23611 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Irf8P23611 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Irf8P23611 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Irf8P23611 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Irf8P23611 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Irf8P23611 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Irf8P23611 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.72■□□□□ 0.43
Irf8P23611 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Irf8P23611 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Irf8P23611 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Irf8P23611 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Irf8P23611 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Irf8P23611 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Irf8P23611 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Irf8P23611 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Irf8P23611 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Irf8P23611 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Irf8P23611 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Irf8P23611 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Irf8P23611 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Irf8P23611 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Irf8P23611 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Irf8P23611 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Irf8P23611 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Irf8P23611 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Irf8P23611 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.71■□□□□ 0.43
Irf8P23611 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.71■□□□□ 0.43
Irf8P23611 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Irf8P23611 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Irf8P23611 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms