Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hoxc8P09025 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Hoxc8P09025 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Hoxc8P09025 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hoxc8P09025 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Hoxc8P09025 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hoxc8P09025 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hoxc8P09025 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hoxc8P09025 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hoxc8P09025 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hoxc8P09025 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hoxc8P09025 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hoxc8P09025 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hoxc8P09025 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hoxc8P09025 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hoxc8P09025 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hoxc8P09025 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hoxc8P09025 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Hoxc8P09025 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Hoxc8P09025 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hoxc8P09025 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Hoxc8P09025 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Hoxc8P09025 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.49■□□□□ 0.39
Hoxc8P09025 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Hoxc8P09025 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC17.49■□□□□ 0.39
Hoxc8P09025 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
Hoxc8P09025 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC17.49■□□□□ 0.39
Hoxc8P09025 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Hoxc8P09025 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Hoxc8P09025 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hoxc8P09025 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hoxc8P09025 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hoxc8P09025 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hoxc8P09025 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hoxc8P09025 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hoxc8P09025 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hoxc8P09025 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Hoxc8P09025 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hoxc8P09025 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hoxc8P09025 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC17.48■□□□□ 0.39
Hoxc8P09025 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC17.48■□□□□ 0.39
Hoxc8P09025 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Hoxc8P09025 Gm9727-201ENSMUST00000161387 555 ntBASIC17.48■□□□□ 0.39
Hoxc8P09025 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Hoxc8P09025 AC131586.3-201ENSMUST00000228355 1367 ntBASIC17.48■□□□□ 0.39
Hoxc8P09025 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hoxc8P09025 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.48■□□□□ 0.39
Hoxc8P09025 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Hoxc8P09025 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Hoxc8P09025 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Hoxc8P09025 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hoxc8P09025 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hoxc8P09025 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hoxc8P09025 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hoxc8P09025 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.47■□□□□ 0.39
Hoxc8P09025 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hoxc8P09025 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.47■□□□□ 0.39
Hoxc8P09025 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC17.47■□□□□ 0.39
Hoxc8P09025 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hoxc8P09025 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC17.47■□□□□ 0.39
Hoxc8P09025 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC17.47■□□□□ 0.39
Hoxc8P09025 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC17.47■□□□□ 0.39
Hoxc8P09025 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC17.47■□□□□ 0.39
Hoxc8P09025 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hoxc8P09025 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hoxc8P09025 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC17.47■□□□□ 0.39
Hoxc8P09025 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hoxc8P09025 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hoxc8P09025 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hoxc8P09025 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hoxc8P09025 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hoxc8P09025 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hoxc8P09025 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.47■□□□□ 0.39
Hoxc8P09025 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Hoxc8P09025 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Hoxc8P09025 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.47■□□□□ 0.39
Hoxc8P09025 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.47■□□□□ 0.39
Hoxc8P09025 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hoxc8P09025 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hoxc8P09025 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hoxc8P09025 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hoxc8P09025 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.46■□□□□ 0.39
Hoxc8P09025 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hoxc8P09025 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hoxc8P09025 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hoxc8P09025 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hoxc8P09025 Gm14494-201ENSMUST00000118786 435 ntBASIC17.46■□□□□ 0.39
Hoxc8P09025 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hoxc8P09025 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC17.46■□□□□ 0.39
Hoxc8P09025 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Hoxc8P09025 Gm27646-201ENSMUST00000183989 110 ntBASIC17.46■□□□□ 0.39
Hoxc8P09025 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Hoxc8P09025 Gm18622-201ENSMUST00000219361 595 ntBASIC17.46■□□□□ 0.39
Hoxc8P09025 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC17.46■□□□□ 0.39
Hoxc8P09025 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Hoxc8P09025 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hoxc8P09025 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.46■□□□□ 0.39
Hoxc8P09025 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hoxc8P09025 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Hoxc8P09025 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms