Protein–RNA interactions for Protein: P08551

Nefl, Neurofilament light polypeptide, mousemouse

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NeflP08551 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NeflP08551 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NeflP08551 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NeflP08551 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
NeflP08551 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NeflP08551 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
NeflP08551 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC21.46■■□□□ 1.03
NeflP08551 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC21.46■■□□□ 1.03
NeflP08551 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NeflP08551 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NeflP08551 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NeflP08551 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC21.46■■□□□ 1.03
NeflP08551 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NeflP08551 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
NeflP08551 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NeflP08551 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NeflP08551 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NeflP08551 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NeflP08551 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
NeflP08551 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NeflP08551 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
NeflP08551 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NeflP08551 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NeflP08551 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
NeflP08551 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NeflP08551 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
NeflP08551 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NeflP08551 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NeflP08551 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NeflP08551 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
NeflP08551 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
NeflP08551 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
NeflP08551 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NeflP08551 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NeflP08551 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
NeflP08551 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC21.44■■□□□ 1.02
NeflP08551 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NeflP08551 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NeflP08551 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC21.44■■□□□ 1.02
NeflP08551 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC21.44■■□□□ 1.02
NeflP08551 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NeflP08551 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
NeflP08551 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
NeflP08551 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
NeflP08551 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NeflP08551 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NeflP08551 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC21.43■■□□□ 1.02
NeflP08551 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC21.43■■□□□ 1.02
NeflP08551 Gm43183-201ENSMUST00000200632 547 ntBASIC21.43■■□□□ 1.02
NeflP08551 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
NeflP08551 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NeflP08551 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NeflP08551 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC21.43■■□□□ 1.02
NeflP08551 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NeflP08551 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
NeflP08551 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
NeflP08551 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
NeflP08551 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
NeflP08551 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC21.42■■□□□ 1.02
NeflP08551 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NeflP08551 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
NeflP08551 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
NeflP08551 H2-K2-201ENSMUST00000174250 1049 ntBASIC21.42■■□□□ 1.02
NeflP08551 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC21.42■■□□□ 1.02
NeflP08551 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
NeflP08551 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC21.42■■□□□ 1.02
NeflP08551 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
NeflP08551 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NeflP08551 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NeflP08551 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NeflP08551 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
NeflP08551 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NeflP08551 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NeflP08551 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NeflP08551 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
NeflP08551 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
NeflP08551 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NeflP08551 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
NeflP08551 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC21.41■■□□□ 1.02
NeflP08551 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NeflP08551 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
NeflP08551 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
NeflP08551 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
NeflP08551 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
NeflP08551 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC21.41■■□□□ 1.02
NeflP08551 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC21.41■■□□□ 1.02
NeflP08551 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC21.41■■□□□ 1.02
NeflP08551 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
NeflP08551 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
NeflP08551 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
NeflP08551 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NeflP08551 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NeflP08551 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NeflP08551 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
NeflP08551 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
NeflP08551 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC21.41■■□□□ 1.02
NeflP08551 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NeflP08551 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
NeflP08551 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC21.41■■□□□ 1.02
NeflP08551 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms