Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.65■□□□□ 0.26
PdgfrbP05622 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PdgfrbP05622 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PdgfrbP05622 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PdgfrbP05622 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PdgfrbP05622 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PdgfrbP05622 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PdgfrbP05622 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PdgfrbP05622 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PdgfrbP05622 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.65■□□□□ 0.26
PdgfrbP05622 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
PdgfrbP05622 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PdgfrbP05622 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
PdgfrbP05622 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
PdgfrbP05622 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.64■□□□□ 0.25
PdgfrbP05622 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.64■□□□□ 0.25
PdgfrbP05622 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.64■□□□□ 0.25
PdgfrbP05622 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PdgfrbP05622 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PdgfrbP05622 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.64■□□□□ 0.25
PdgfrbP05622 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PdgfrbP05622 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.64■□□□□ 0.25
PdgfrbP05622 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PdgfrbP05622 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
PdgfrbP05622 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
PdgfrbP05622 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PdgfrbP05622 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
PdgfrbP05622 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
PdgfrbP05622 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PdgfrbP05622 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.64■□□□□ 0.25
PdgfrbP05622 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PdgfrbP05622 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PdgfrbP05622 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PdgfrbP05622 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
PdgfrbP05622 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.63■□□□□ 0.25
PdgfrbP05622 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PdgfrbP05622 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PdgfrbP05622 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PdgfrbP05622 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PdgfrbP05622 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
PdgfrbP05622 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PdgfrbP05622 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.63■□□□□ 0.25
PdgfrbP05622 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PdgfrbP05622 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PdgfrbP05622 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PdgfrbP05622 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PdgfrbP05622 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PdgfrbP05622 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
PdgfrbP05622 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.63■□□□□ 0.25
PdgfrbP05622 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PdgfrbP05622 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PdgfrbP05622 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PdgfrbP05622 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PdgfrbP05622 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PdgfrbP05622 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PdgfrbP05622 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
PdgfrbP05622 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PdgfrbP05622 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PdgfrbP05622 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.62■□□□□ 0.25
PdgfrbP05622 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.62■□□□□ 0.25
PdgfrbP05622 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PdgfrbP05622 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PdgfrbP05622 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PdgfrbP05622 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PdgfrbP05622 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.62■□□□□ 0.25
PdgfrbP05622 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.62■□□□□ 0.25
PdgfrbP05622 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PdgfrbP05622 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PdgfrbP05622 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.62■□□□□ 0.25
PdgfrbP05622 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PdgfrbP05622 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PdgfrbP05622 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PdgfrbP05622 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.61■□□□□ 0.25
PdgfrbP05622 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PdgfrbP05622 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PdgfrbP05622 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PdgfrbP05622 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PdgfrbP05622 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PdgfrbP05622 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PdgfrbP05622 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PdgfrbP05622 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PdgfrbP05622 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.61■□□□□ 0.25
PdgfrbP05622 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
PdgfrbP05622 Gm37722-201ENSMUST00000193757 208 ntBASIC16.61■□□□□ 0.25
PdgfrbP05622 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PdgfrbP05622 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PdgfrbP05622 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.61■□□□□ 0.25
PdgfrbP05622 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PdgfrbP05622 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
PdgfrbP05622 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PdgfrbP05622 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
PdgfrbP05622 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PdgfrbP05622 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PdgfrbP05622 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PdgfrbP05622 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PdgfrbP05622 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PdgfrbP05622 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PdgfrbP05622 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PdgfrbP05622 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PdgfrbP05622 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms