Protein–RNA interactions for Protein: P01788

Ig heavy chain V region H8, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01788 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P01788 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P01788 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P01788 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P01788 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P01788 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P01788 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P01788 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
P01788 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P01788 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
P01788 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
P01788 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P01788 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P01788 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
P01788 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P01788 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.04□□□□□ -0.32
P01788 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P01788 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P01788 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P01788 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P01788 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P01788 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P01788 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
P01788 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.04□□□□□ -0.32
P01788 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
P01788 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P01788 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P01788 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
P01788 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
P01788 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.03□□□□□ -0.32
P01788 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
P01788 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P01788 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
P01788 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P01788 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P01788 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
P01788 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
P01788 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
P01788 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
P01788 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P01788 Gm7638-201ENSMUST00000121348 967 ntBASIC13.03□□□□□ -0.32
P01788 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
P01788 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC13.03□□□□□ -0.32
P01788 Gm10698-201ENSMUST00000182663 604 ntBASIC13.03□□□□□ -0.32
P01788 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P01788 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
P01788 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P01788 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC13.03□□□□□ -0.32
P01788 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
P01788 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
P01788 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
P01788 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
P01788 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.03□□□□□ -0.32
P01788 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
P01788 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
P01788 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
P01788 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
P01788 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
P01788 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
P01788 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
P01788 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
P01788 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
P01788 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
P01788 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
P01788 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.02□□□□□ -0.32
P01788 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
P01788 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
P01788 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
P01788 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
P01788 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
P01788 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
P01788 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
P01788 Gm5643-201ENSMUST00000117081 966 ntBASIC13.02□□□□□ -0.33
P01788 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC13.02□□□□□ -0.33
P01788 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
P01788 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC13.02□□□□□ -0.33
P01788 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC13.02□□□□□ -0.33
P01788 Gm9731-201ENSMUST00000209480 747 ntBASIC13.02□□□□□ -0.33
P01788 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P01788 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC13.02□□□□□ -0.33
P01788 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
P01788 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P01788 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P01788 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
P01788 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
P01788 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
P01788 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
P01788 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P01788 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P01788 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
P01788 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
P01788 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
P01788 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P01788 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P01788 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
P01788 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
P01788 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
P01788 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.01□□□□□ -0.33
P01788 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P01788 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms