Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Igh-VJ558P01758 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.25□□□□□ -0.13
Igh-VJ558P01758 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Igh-VJ558P01758 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Igh-VJ558P01758 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Igh-VJ558P01758 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Igh-VJ558P01758 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Igh-VJ558P01758 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Igh-VJ558P01758 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Igh-VJ558P01758 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Igh-VJ558P01758 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Igh-VJ558P01758 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Igh-VJ558P01758 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Igh-VJ558P01758 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.24□□□□□ -0.13
Igh-VJ558P01758 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Igh-VJ558P01758 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Igh-VJ558P01758 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Igh-VJ558P01758 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Igh-VJ558P01758 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Igh-VJ558P01758 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Igh-VJ558P01758 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Igh-VJ558P01758 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Igh-VJ558P01758 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Igh-VJ558P01758 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.24□□□□□ -0.13
Igh-VJ558P01758 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.24□□□□□ -0.13
Igh-VJ558P01758 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC14.24□□□□□ -0.13
Igh-VJ558P01758 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Igh-VJ558P01758 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Igh-VJ558P01758 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Igh-VJ558P01758 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.24□□□□□ -0.13
Igh-VJ558P01758 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Igh-VJ558P01758 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Igh-VJ558P01758 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Igh-VJ558P01758 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Igh-VJ558P01758 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Igh-VJ558P01758 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Igh-VJ558P01758 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Igh-VJ558P01758 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Igh-VJ558P01758 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Igh-VJ558P01758 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.24□□□□□ -0.13
Igh-VJ558P01758 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.24□□□□□ -0.13
Igh-VJ558P01758 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Igh-VJ558P01758 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Igh-VJ558P01758 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Igh-VJ558P01758 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Igh-VJ558P01758 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Igh-VJ558P01758 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Igh-VJ558P01758 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Igh-VJ558P01758 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Igh-VJ558P01758 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.24□□□□□ -0.13
Igh-VJ558P01758 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Igh-VJ558P01758 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Igh-VJ558P01758 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Igh-VJ558P01758 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Igh-VJ558P01758 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Igh-VJ558P01758 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Igh-VJ558P01758 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Igh-VJ558P01758 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Igh-VJ558P01758 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Igh-VJ558P01758 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Igh-VJ558P01758 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Igh-VJ558P01758 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Igh-VJ558P01758 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Igh-VJ558P01758 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.23□□□□□ -0.13
Igh-VJ558P01758 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Igh-VJ558P01758 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Igh-VJ558P01758 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Igh-VJ558P01758 Gm27389-201ENSMUST00000183622 195 ntBASIC14.23□□□□□ -0.13
Igh-VJ558P01758 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.23□□□□□ -0.13
Igh-VJ558P01758 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.23□□□□□ -0.13
Igh-VJ558P01758 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC14.23□□□□□ -0.13
Igh-VJ558P01758 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.23□□□□□ -0.13
Igh-VJ558P01758 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Igh-VJ558P01758 Gm18032-201ENSMUST00000222541 538 ntBASIC14.23□□□□□ -0.13
Igh-VJ558P01758 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Igh-VJ558P01758 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Igh-VJ558P01758 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Igh-VJ558P01758 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Igh-VJ558P01758 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.23□□□□□ -0.13
Igh-VJ558P01758 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Igh-VJ558P01758 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Igh-VJ558P01758 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.23□□□□□ -0.13
Igh-VJ558P01758 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Igh-VJ558P01758 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Igh-VJ558P01758 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Igh-VJ558P01758 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Igh-VJ558P01758 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Igh-VJ558P01758 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Igh-VJ558P01758 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Igh-VJ558P01758 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Igh-VJ558P01758 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Igh-VJ558P01758 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Igh-VJ558P01758 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Igh-VJ558P01758 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Igh-VJ558P01758 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Igh-VJ558P01758 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.22□□□□□ -0.13
Igh-VJ558P01758 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.22□□□□□ -0.13
Igh-VJ558P01758 Gm22697-201ENSMUST00000175194 63 ntBASIC14.22□□□□□ -0.13
Igh-VJ558P01758 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Igh-VJ558P01758 Gm37722-201ENSMUST00000193757 208 ntBASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms