Protein–RNA interactions for Protein: P01653

Ig kappa chain V-V region W3082, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01653 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
P01653 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01653 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01653 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01653 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01653 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01653 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
P01653 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01653 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01653 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01653 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01653 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.11■□□□□ 0.33
P01653 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01653 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01653 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01653 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01653 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
P01653 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
P01653 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
P01653 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
P01653 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
P01653 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
P01653 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.1■□□□□ 0.33
P01653 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.1■□□□□ 0.33
P01653 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.1■□□□□ 0.33
P01653 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.1■□□□□ 0.33
P01653 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P01653 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P01653 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
P01653 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P01653 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.1■□□□□ 0.33
P01653 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P01653 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
P01653 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P01653 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
P01653 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01653 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
P01653 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01653 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01653 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01653 Gm15372-201ENSMUST00000120729 834 ntBASIC17.09■□□□□ 0.33
P01653 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.09■□□□□ 0.33
P01653 Rprl3-201ENSMUST00000157400 290 ntBASIC17.09■□□□□ 0.33
P01653 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.09■□□□□ 0.33
P01653 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01653 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
P01653 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01653 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01653 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01653 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01653 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01653 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01653 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
P01653 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01653 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01653 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01653 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
P01653 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01653 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
P01653 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01653 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
P01653 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
P01653 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
P01653 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
P01653 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.08■□□□□ 0.33
P01653 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.08■□□□□ 0.33
P01653 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
P01653 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
P01653 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
P01653 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.08■□□□□ 0.32
P01653 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
P01653 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
P01653 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P01653 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.08■□□□□ 0.32
P01653 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
P01653 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
P01653 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
P01653 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
P01653 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
P01653 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
P01653 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
P01653 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
P01653 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
P01653 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.08■□□□□ 0.32
P01653 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
P01653 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
P01653 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
P01653 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
P01653 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
P01653 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.07■□□□□ 0.32
P01653 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P01653 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P01653 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P01653 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
P01653 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P01653 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
P01653 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
P01653 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
P01653 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P01653 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms