Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ifna1P01572 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC13.92□□□□□ -0.18
Ifna1P01572 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ifna1P01572 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC13.92□□□□□ -0.18
Ifna1P01572 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ifna1P01572 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ifna1P01572 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ifna1P01572 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ifna1P01572 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC13.92□□□□□ -0.18
Ifna1P01572 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ifna1P01572 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Ifna1P01572 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Ifna1P01572 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ifna1P01572 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ifna1P01572 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ifna1P01572 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ifna1P01572 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC13.92□□□□□ -0.18
Ifna1P01572 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC13.92□□□□□ -0.18
Ifna1P01572 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ifna1P01572 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ifna1P01572 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC13.92□□□□□ -0.18
Ifna1P01572 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ifna1P01572 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ifna1P01572 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ifna1P01572 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.92□□□□□ -0.18
Ifna1P01572 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ifna1P01572 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ifna1P01572 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ifna1P01572 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ifna1P01572 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ifna1P01572 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ifna1P01572 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ifna1P01572 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Ifna1P01572 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ifna1P01572 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ifna1P01572 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.92□□□□□ -0.18
Ifna1P01572 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ifna1P01572 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ifna1P01572 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ifna1P01572 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ifna1P01572 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ifna1P01572 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Ifna1P01572 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ifna1P01572 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ifna1P01572 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ifna1P01572 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ifna1P01572 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ifna1P01572 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ifna1P01572 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ifna1P01572 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ifna1P01572 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ifna1P01572 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Ifna1P01572 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ifna1P01572 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ifna1P01572 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ifna1P01572 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ifna1P01572 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ifna1P01572 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ifna1P01572 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ifna1P01572 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ifna1P01572 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ifna1P01572 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ifna1P01572 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ifna1P01572 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ifna1P01572 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Ifna1P01572 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ifna1P01572 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ifna1P01572 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ifna1P01572 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC13.9□□□□□ -0.18
Ifna1P01572 Gm27000-201ENSMUST00000182943 842 ntBASIC13.9□□□□□ -0.18
Ifna1P01572 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Ifna1P01572 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ifna1P01572 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ifna1P01572 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ifna1P01572 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ifna1P01572 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ifna1P01572 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ifna1P01572 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ifna1P01572 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Ifna1P01572 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ifna1P01572 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.19
Ifna1P01572 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Ifna1P01572 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ifna1P01572 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ifna1P01572 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ifna1P01572 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Ifna1P01572 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ifna1P01572 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.89□□□□□ -0.19
Ifna1P01572 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ifna1P01572 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ifna1P01572 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
Ifna1P01572 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ifna1P01572 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ifna1P01572 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ifna1P01572 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ifna1P01572 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ifna1P01572 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ifna1P01572 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC13.89□□□□□ -0.19
Ifna1P01572 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ifna1P01572 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms