Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hdac3O88895 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hdac3O88895 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hdac3O88895 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hdac3O88895 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hdac3O88895 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hdac3O88895 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hdac3O88895 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hdac3O88895 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hdac3O88895 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hdac3O88895 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.73□□□□□ -0.05
Hdac3O88895 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.72□□□□□ -0.05
Hdac3O88895 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hdac3O88895 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.72□□□□□ -0.05
Hdac3O88895 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Hdac3O88895 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Hdac3O88895 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hdac3O88895 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hdac3O88895 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.72□□□□□ -0.05
Hdac3O88895 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hdac3O88895 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hdac3O88895 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.72□□□□□ -0.05
Hdac3O88895 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hdac3O88895 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.72□□□□□ -0.05
Hdac3O88895 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hdac3O88895 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC14.72□□□□□ -0.05
Hdac3O88895 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Hdac3O88895 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hdac3O88895 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hdac3O88895 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hdac3O88895 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hdac3O88895 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hdac3O88895 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hdac3O88895 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Hdac3O88895 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hdac3O88895 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Hdac3O88895 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hdac3O88895 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC14.72□□□□□ -0.05
Hdac3O88895 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hdac3O88895 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Hdac3O88895 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hdac3O88895 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hdac3O88895 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hdac3O88895 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hdac3O88895 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hdac3O88895 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hdac3O88895 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Hdac3O88895 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hdac3O88895 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hdac3O88895 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hdac3O88895 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hdac3O88895 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hdac3O88895 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
Hdac3O88895 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Hdac3O88895 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC14.71□□□□□ -0.05
Hdac3O88895 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hdac3O88895 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC14.71□□□□□ -0.05
Hdac3O88895 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC14.71□□□□□ -0.05
Hdac3O88895 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Hdac3O88895 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hdac3O88895 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Hdac3O88895 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hdac3O88895 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hdac3O88895 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.71□□□□□ -0.05
Hdac3O88895 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hdac3O88895 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hdac3O88895 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.71□□□□□ -0.05
Hdac3O88895 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hdac3O88895 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Hdac3O88895 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Hdac3O88895 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Hdac3O88895 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Hdac3O88895 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Hdac3O88895 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
Hdac3O88895 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Hdac3O88895 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hdac3O88895 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hdac3O88895 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Hdac3O88895 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hdac3O88895 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hdac3O88895 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hdac3O88895 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Hdac3O88895 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hdac3O88895 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.7□□□□□ -0.06
Hdac3O88895 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hdac3O88895 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hdac3O88895 Gm37055-201ENSMUST00000191866 133 ntBASIC14.7□□□□□ -0.06
Hdac3O88895 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC14.7□□□□□ -0.06
Hdac3O88895 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC14.7□□□□□ -0.06
Hdac3O88895 Gm7791-201ENSMUST00000219066 539 ntBASIC14.7□□□□□ -0.06
Hdac3O88895 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Hdac3O88895 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Hdac3O88895 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.7□□□□□ -0.06
Hdac3O88895 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Hdac3O88895 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Hdac3O88895 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hdac3O88895 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hdac3O88895 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Hdac3O88895 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hdac3O88895 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms