Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cops4O88544 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cops4O88544 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
Cops4O88544 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cops4O88544 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Cops4O88544 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC15.24■□□□□ 0.03
Cops4O88544 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cops4O88544 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Cops4O88544 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.24■□□□□ 0.03
Cops4O88544 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cops4O88544 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.24■□□□□ 0.03
Cops4O88544 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cops4O88544 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Cops4O88544 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cops4O88544 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cops4O88544 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cops4O88544 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cops4O88544 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cops4O88544 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cops4O88544 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cops4O88544 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cops4O88544 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cops4O88544 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cops4O88544 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.23■□□□□ 0.03
Cops4O88544 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC15.23■□□□□ 0.03
Cops4O88544 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cops4O88544 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cops4O88544 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cops4O88544 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cops4O88544 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cops4O88544 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cops4O88544 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cops4O88544 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cops4O88544 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cops4O88544 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cops4O88544 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cops4O88544 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Cops4O88544 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cops4O88544 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cops4O88544 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Cops4O88544 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cops4O88544 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cops4O88544 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cops4O88544 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cops4O88544 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cops4O88544 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cops4O88544 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cops4O88544 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.22■□□□□ 0.03
Cops4O88544 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cops4O88544 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cops4O88544 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.22■□□□□ 0.03
Cops4O88544 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cops4O88544 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Cops4O88544 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Cops4O88544 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cops4O88544 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cops4O88544 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cops4O88544 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cops4O88544 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.22■□□□□ 0.03
Cops4O88544 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cops4O88544 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.21■□□□□ 0.03
Cops4O88544 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cops4O88544 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
Cops4O88544 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cops4O88544 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cops4O88544 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cops4O88544 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cops4O88544 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cops4O88544 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Cops4O88544 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cops4O88544 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cops4O88544 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cops4O88544 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cops4O88544 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cops4O88544 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC15.21■□□□□ 0.03
Cops4O88544 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cops4O88544 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cops4O88544 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cops4O88544 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Cops4O88544 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cops4O88544 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.21■□□□□ 0.03
Cops4O88544 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Cops4O88544 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cops4O88544 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cops4O88544 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Cops4O88544 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cops4O88544 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cops4O88544 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cops4O88544 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cops4O88544 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.21■□□□□ 0.02
Cops4O88544 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cops4O88544 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Cops4O88544 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cops4O88544 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cops4O88544 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
Cops4O88544 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cops4O88544 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cops4O88544 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cops4O88544 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cops4O88544 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms