Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cops3O88543 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cops3O88543 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cops3O88543 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Cops3O88543 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cops3O88543 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cops3O88543 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Cops3O88543 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cops3O88543 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cops3O88543 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cops3O88543 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cops3O88543 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cops3O88543 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cops3O88543 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cops3O88543 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cops3O88543 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cops3O88543 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.76□□□□□ -0.05
Cops3O88543 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.76□□□□□ -0.05
Cops3O88543 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cops3O88543 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cops3O88543 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cops3O88543 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cops3O88543 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cops3O88543 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
Cops3O88543 Gm38027-201ENSMUST00000192315 235 ntBASIC14.76□□□□□ -0.05
Cops3O88543 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cops3O88543 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cops3O88543 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cops3O88543 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cops3O88543 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Cops3O88543 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cops3O88543 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cops3O88543 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cops3O88543 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cops3O88543 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cops3O88543 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cops3O88543 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cops3O88543 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cops3O88543 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cops3O88543 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cops3O88543 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cops3O88543 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cops3O88543 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cops3O88543 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cops3O88543 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cops3O88543 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cops3O88543 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cops3O88543 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Cops3O88543 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.75□□□□□ -0.05
Cops3O88543 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC14.75□□□□□ -0.05
Cops3O88543 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cops3O88543 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Cops3O88543 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cops3O88543 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cops3O88543 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cops3O88543 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Cops3O88543 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cops3O88543 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.75□□□□□ -0.05
Cops3O88543 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.75□□□□□ -0.05
Cops3O88543 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cops3O88543 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cops3O88543 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cops3O88543 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cops3O88543 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.75□□□□□ -0.05
Cops3O88543 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cops3O88543 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Cops3O88543 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cops3O88543 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cops3O88543 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cops3O88543 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Cops3O88543 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cops3O88543 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cops3O88543 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cops3O88543 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cops3O88543 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Cops3O88543 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cops3O88543 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cops3O88543 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC14.74□□□□□ -0.05
Cops3O88543 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.74□□□□□ -0.05
Cops3O88543 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.74□□□□□ -0.05
Cops3O88543 Il3ra-202ENSMUST00000223589 738 ntBASIC14.74□□□□□ -0.05
Cops3O88543 AC175538.1-201ENSMUST00000225343 1269 ntBASIC14.74□□□□□ -0.05
Cops3O88543 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cops3O88543 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.74□□□□□ -0.05
Cops3O88543 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Cops3O88543 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cops3O88543 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cops3O88543 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cops3O88543 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cops3O88543 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Cops3O88543 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cops3O88543 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cops3O88543 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.74□□□□□ -0.05
Cops3O88543 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cops3O88543 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cops3O88543 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cops3O88543 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cops3O88543 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cops3O88543 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Cops3O88543 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms