Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cacna1hO88427 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Cacna1hO88427 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cacna1hO88427 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cacna1hO88427 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Cacna1hO88427 Hsf1-204ENSMUST00000226872 2104 ntBASIC15.97■□□□□ 0.15
Cacna1hO88427 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cacna1hO88427 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.97■□□□□ 0.15
Cacna1hO88427 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cacna1hO88427 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cacna1hO88427 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15.97■□□□□ 0.15
Cacna1hO88427 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cacna1hO88427 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cacna1hO88427 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.97■□□□□ 0.15
Cacna1hO88427 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Cacna1hO88427 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cacna1hO88427 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cacna1hO88427 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cacna1hO88427 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.96■□□□□ 0.15
Cacna1hO88427 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cacna1hO88427 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Cacna1hO88427 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC15.96■□□□□ 0.15
Cacna1hO88427 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cacna1hO88427 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Cacna1hO88427 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cacna1hO88427 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cacna1hO88427 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Cacna1hO88427 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Cacna1hO88427 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC15.96■□□□□ 0.14
Cacna1hO88427 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Cacna1hO88427 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC15.95■□□□□ 0.14
Cacna1hO88427 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Cacna1hO88427 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cacna1hO88427 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cacna1hO88427 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cacna1hO88427 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.95■□□□□ 0.14
Cacna1hO88427 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cacna1hO88427 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cacna1hO88427 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cacna1hO88427 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cacna1hO88427 Gm5177-201ENSMUST00000183092 997 ntBASIC15.95■□□□□ 0.14
Cacna1hO88427 Gm27430-201ENSMUST00000184585 107 ntBASIC15.95■□□□□ 0.14
Cacna1hO88427 Gm44333-201ENSMUST00000197168 107 ntBASIC15.95■□□□□ 0.14
Cacna1hO88427 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC15.95■□□□□ 0.14
Cacna1hO88427 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cacna1hO88427 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cacna1hO88427 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cacna1hO88427 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
Cacna1hO88427 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cacna1hO88427 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Cacna1hO88427 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Cacna1hO88427 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cacna1hO88427 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.94■□□□□ 0.14
Cacna1hO88427 Rprl2-201ENSMUST00000157150 290 ntBASIC15.94■□□□□ 0.14
Cacna1hO88427 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cacna1hO88427 Gm37153-201ENSMUST00000193637 231 ntBASIC15.94■□□□□ 0.14
Cacna1hO88427 AC132467.2-202ENSMUST00000227726 559 ntBASIC15.94■□□□□ 0.14
Cacna1hO88427 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.94■□□□□ 0.14
Cacna1hO88427 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cacna1hO88427 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cacna1hO88427 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cacna1hO88427 Gm15222-202ENSMUST00000228667 1726 ntBASIC15.94■□□□□ 0.14
Cacna1hO88427 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Cacna1hO88427 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC15.94■□□□□ 0.14
Cacna1hO88427 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cacna1hO88427 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cacna1hO88427 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cacna1hO88427 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cacna1hO88427 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Cacna1hO88427 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cacna1hO88427 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.94■□□□□ 0.14
Cacna1hO88427 Gm4899-201ENSMUST00000178708 719 ntBASIC15.94■□□□□ 0.14
Cacna1hO88427 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cacna1hO88427 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cacna1hO88427 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cacna1hO88427 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cacna1hO88427 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cacna1hO88427 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cacna1hO88427 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Cacna1hO88427 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cacna1hO88427 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cacna1hO88427 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.93■□□□□ 0.14
Cacna1hO88427 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cacna1hO88427 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
Cacna1hO88427 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cacna1hO88427 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC15.93■□□□□ 0.14
Cacna1hO88427 AC155729.1-201ENSMUST00000227758 544 ntBASIC15.93■□□□□ 0.14
Cacna1hO88427 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cacna1hO88427 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cacna1hO88427 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cacna1hO88427 BC021767-201ENSMUST00000126387 1716 ntBASIC15.93■□□□□ 0.14
Cacna1hO88427 Gm10616-201ENSMUST00000205285 2127 ntBASIC15.93■□□□□ 0.14
Cacna1hO88427 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cacna1hO88427 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cacna1hO88427 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cacna1hO88427 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cacna1hO88427 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cacna1hO88427 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC15.93■□□□□ 0.14
Cacna1hO88427 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cacna1hO88427 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms