Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tgfbr3O88393 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tgfbr3O88393 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tgfbr3O88393 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Tgfbr3O88393 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Tgfbr3O88393 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC15.62■□□□□ 0.09
Tgfbr3O88393 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tgfbr3O88393 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tgfbr3O88393 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Tgfbr3O88393 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tgfbr3O88393 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tgfbr3O88393 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
Tgfbr3O88393 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC15.61■□□□□ 0.09
Tgfbr3O88393 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Tgfbr3O88393 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tgfbr3O88393 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tgfbr3O88393 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tgfbr3O88393 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tgfbr3O88393 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Tgfbr3O88393 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tgfbr3O88393 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tgfbr3O88393 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Tgfbr3O88393 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tgfbr3O88393 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Tgfbr3O88393 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tgfbr3O88393 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Tgfbr3O88393 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tgfbr3O88393 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tgfbr3O88393 Gm11779-201ENSMUST00000118541 368 ntBASIC15.6■□□□□ 0.09
Tgfbr3O88393 Gm15173-201ENSMUST00000122049 433 ntBASIC15.6■□□□□ 0.09
Tgfbr3O88393 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Tgfbr3O88393 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tgfbr3O88393 Gm7230-201ENSMUST00000173026 815 ntBASIC15.6■□□□□ 0.09
Tgfbr3O88393 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC15.6■□□□□ 0.09
Tgfbr3O88393 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.6■□□□□ 0.09
Tgfbr3O88393 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Tgfbr3O88393 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tgfbr3O88393 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tgfbr3O88393 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tgfbr3O88393 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tgfbr3O88393 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.6■□□□□ 0.09
Tgfbr3O88393 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Tgfbr3O88393 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tgfbr3O88393 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Tgfbr3O88393 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tgfbr3O88393 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tgfbr3O88393 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tgfbr3O88393 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Tgfbr3O88393 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Tgfbr3O88393 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tgfbr3O88393 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Tgfbr3O88393 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.59■□□□□ 0.09
Tgfbr3O88393 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tgfbr3O88393 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.59■□□□□ 0.09
Tgfbr3O88393 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tgfbr3O88393 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.59■□□□□ 0.09
Tgfbr3O88393 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.59■□□□□ 0.09
Tgfbr3O88393 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC15.59■□□□□ 0.09
Tgfbr3O88393 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.59■□□□□ 0.09
Tgfbr3O88393 Gm5264-201ENSMUST00000190584 848 ntBASIC15.59■□□□□ 0.09
Tgfbr3O88393 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.59■□□□□ 0.09
Tgfbr3O88393 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.59■□□□□ 0.09
Tgfbr3O88393 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.59■□□□□ 0.09
Tgfbr3O88393 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Tgfbr3O88393 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Tgfbr3O88393 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tgfbr3O88393 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Tgfbr3O88393 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
Tgfbr3O88393 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.59■□□□□ 0.09
Tgfbr3O88393 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tgfbr3O88393 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tgfbr3O88393 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tgfbr3O88393 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC15.59■□□□□ 0.09
Tgfbr3O88393 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tgfbr3O88393 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Tgfbr3O88393 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Tgfbr3O88393 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Tgfbr3O88393 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.58■□□□□ 0.09
Tgfbr3O88393 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Tgfbr3O88393 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tgfbr3O88393 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Tgfbr3O88393 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tgfbr3O88393 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tgfbr3O88393 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tgfbr3O88393 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.58■□□□□ 0.08
Tgfbr3O88393 Gm2213-201ENSMUST00000197485 688 ntBASIC15.58■□□□□ 0.08
Tgfbr3O88393 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.58■□□□□ 0.08
Tgfbr3O88393 Psmb5-202ENSMUST00000227257 622 ntBASIC15.58■□□□□ 0.08
Tgfbr3O88393 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Tgfbr3O88393 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tgfbr3O88393 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC15.58■□□□□ 0.08
Tgfbr3O88393 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.58■□□□□ 0.08
Tgfbr3O88393 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tgfbr3O88393 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tgfbr3O88393 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tgfbr3O88393 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tgfbr3O88393 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.57■□□□□ 0.08
Tgfbr3O88393 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.57■□□□□ 0.08
Tgfbr3O88393 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Tgfbr3O88393 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms