Protein–RNA interactions for Protein: O88343

Slc4a4, Electrogenic sodium bicarbonate cotransporter 1, mousemouse

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a4O88343 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc4a4O88343 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC19.4■□□□□ 0.7
Slc4a4O88343 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC19.4■□□□□ 0.7
Slc4a4O88343 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Slc4a4O88343 AC124569.2-201ENSMUST00000225998 818 ntBASIC19.4■□□□□ 0.7
Slc4a4O88343 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.4■□□□□ 0.7
Slc4a4O88343 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc4a4O88343 Gm8839-201ENSMUST00000121279 1645 ntBASIC19.4■□□□□ 0.7
Slc4a4O88343 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc4a4O88343 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc4a4O88343 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
Slc4a4O88343 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc4a4O88343 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc4a4O88343 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc4a4O88343 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc4a4O88343 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc4a4O88343 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Slc4a4O88343 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc4a4O88343 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc4a4O88343 Gm17971-201ENSMUST00000190239 806 ntBASIC19.39■□□□□ 0.69
Slc4a4O88343 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Slc4a4O88343 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc4a4O88343 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc4a4O88343 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc4a4O88343 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc4a4O88343 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc4a4O88343 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc4a4O88343 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc4a4O88343 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc4a4O88343 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
Slc4a4O88343 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Slc4a4O88343 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Slc4a4O88343 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Slc4a4O88343 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc4a4O88343 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc4a4O88343 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC19.38■□□□□ 0.69
Slc4a4O88343 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Slc4a4O88343 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc4a4O88343 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC19.38■□□□□ 0.69
Slc4a4O88343 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Slc4a4O88343 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Slc4a4O88343 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc4a4O88343 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.38■□□□□ 0.69
Slc4a4O88343 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc4a4O88343 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc4a4O88343 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Slc4a4O88343 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Slc4a4O88343 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc4a4O88343 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc4a4O88343 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc4a4O88343 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Slc4a4O88343 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc4a4O88343 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Slc4a4O88343 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC19.37■□□□□ 0.69
Slc4a4O88343 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Slc4a4O88343 AC153794.1-201ENSMUST00000169148 126 ntBASIC19.37■□□□□ 0.69
Slc4a4O88343 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC19.37■□□□□ 0.69
Slc4a4O88343 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc4a4O88343 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc4a4O88343 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.37■□□□□ 0.69
Slc4a4O88343 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Slc4a4O88343 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Slc4a4O88343 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc4a4O88343 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc4a4O88343 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc4a4O88343 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc4a4O88343 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc4a4O88343 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc4a4O88343 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc4a4O88343 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc4a4O88343 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC19.36■□□□□ 0.69
Slc4a4O88343 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Slc4a4O88343 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC19.36■□□□□ 0.69
Slc4a4O88343 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC19.36■□□□□ 0.69
Slc4a4O88343 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC19.36■□□□□ 0.69
Slc4a4O88343 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Slc4a4O88343 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc4a4O88343 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc4a4O88343 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc4a4O88343 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc4a4O88343 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc4a4O88343 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc4a4O88343 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc4a4O88343 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.36■□□□□ 0.69
Slc4a4O88343 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc4a4O88343 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Slc4a4O88343 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Slc4a4O88343 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc4a4O88343 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC19.35■□□□□ 0.69
Slc4a4O88343 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc4a4O88343 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc4a4O88343 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc4a4O88343 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC19.35■□□□□ 0.69
Slc4a4O88343 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slc4a4O88343 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Slc4a4O88343 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Slc4a4O88343 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Slc4a4O88343 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Slc4a4O88343 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Slc4a4O88343 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms