Protein–RNA interactions for Protein: O88322

Nid2, Nidogen-2, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid2O88322 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Nid2O88322 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Nid2O88322 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
Nid2O88322 Gm15920-201ENSMUST00000118998 402 ntBASIC21.35■■□□□ 1.01
Nid2O88322 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Nid2O88322 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Nid2O88322 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC21.35■■□□□ 1.01
Nid2O88322 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Nid2O88322 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Nid2O88322 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Nid2O88322 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Nid2O88322 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
Nid2O88322 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nid2O88322 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nid2O88322 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
Nid2O88322 Gm18622-201ENSMUST00000219361 595 ntBASIC21.34■■□□□ 1.01
Nid2O88322 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nid2O88322 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nid2O88322 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nid2O88322 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Nid2O88322 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Nid2O88322 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC21.33■■□□□ 1.01
Nid2O88322 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC21.33■■□□□ 1.01
Nid2O88322 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC21.33■■□□□ 1.01
Nid2O88322 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Nid2O88322 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Nid2O88322 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC21.33■■□□□ 1
Nid2O88322 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC21.33■■□□□ 1
Nid2O88322 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Nid2O88322 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Nid2O88322 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC21.32■■□□□ 1
Nid2O88322 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Nid2O88322 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Nid2O88322 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nid2O88322 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC21.32■■□□□ 1
Nid2O88322 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nid2O88322 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
Nid2O88322 AC117588.1-201ENSMUST00000228510 999 ntBASIC21.32■■□□□ 1
Nid2O88322 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nid2O88322 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC21.32■■□□□ 1
Nid2O88322 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nid2O88322 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC21.32■■□□□ 1
Nid2O88322 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC21.32■■□□□ 1
Nid2O88322 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC21.32■■□□□ 1
Nid2O88322 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Nid2O88322 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC21.31■■□□□ 1
Nid2O88322 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC21.31■■□□□ 1
Nid2O88322 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC21.31■■□□□ 1
Nid2O88322 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC21.31■■□□□ 1
Nid2O88322 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC21.31■■□□□ 1
Nid2O88322 AC131709.1-201ENSMUST00000224731 1180 ntBASIC21.31■■□□□ 1
Nid2O88322 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC21.31■■□□□ 1
Nid2O88322 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Nid2O88322 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
Nid2O88322 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Nid2O88322 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC21.3■■□□□ 1
Nid2O88322 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC21.3■■□□□ 1
Nid2O88322 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Nid2O88322 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC21.3■■□□□ 1
Nid2O88322 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Nid2O88322 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nid2O88322 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Nid2O88322 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC21.29■■□□□ 1
Nid2O88322 Gm2308-201ENSMUST00000166539 1004 ntBASIC21.29■■□□□ 1
Nid2O88322 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC21.29■■□□□ 1
Nid2O88322 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Nid2O88322 AC124549.3-201ENSMUST00000225541 367 ntBASIC21.29■■□□□ 1
Nid2O88322 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
Nid2O88322 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Nid2O88322 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nid2O88322 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Nid2O88322 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Nid2O88322 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC21.29■■□□□ 1
Nid2O88322 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Nid2O88322 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nid2O88322 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
Nid2O88322 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nid2O88322 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Nid2O88322 Gm8784-201ENSMUST00000222096 1435 ntBASIC21.29■■□□□ 1
Nid2O88322 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Nid2O88322 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC21.29■■□□□ 1
Nid2O88322 Gm37153-201ENSMUST00000193637 231 ntBASIC21.29■■□□□ 1
Nid2O88322 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
Nid2O88322 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nid2O88322 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC21.29■■□□□ 1
Nid2O88322 AC132265.1-201ENSMUST00000219233 1665 ntBASIC21.28■■□□□ 1
Nid2O88322 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nid2O88322 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nid2O88322 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC21.28■■□□□ 1
Nid2O88322 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nid2O88322 AC158982.1-201ENSMUST00000228377 901 ntBASIC21.28■■□□□ 1
Nid2O88322 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC21.28■■□□□ 1
Nid2O88322 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nid2O88322 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nid2O88322 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nid2O88322 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Nid2O88322 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC21.27■■□□□ 1
Nid2O88322 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Nid2O88322 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Nid2O88322 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC21.27■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms