Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pdlim3O70209 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pdlim3O70209 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.95□□□□□ -0.02
Pdlim3O70209 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Pdlim3O70209 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pdlim3O70209 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC14.95□□□□□ -0.02
Pdlim3O70209 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pdlim3O70209 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pdlim3O70209 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pdlim3O70209 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pdlim3O70209 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pdlim3O70209 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pdlim3O70209 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pdlim3O70209 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pdlim3O70209 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Pdlim3O70209 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.95□□□□□ -0.02
Pdlim3O70209 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pdlim3O70209 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pdlim3O70209 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pdlim3O70209 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pdlim3O70209 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pdlim3O70209 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pdlim3O70209 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pdlim3O70209 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pdlim3O70209 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pdlim3O70209 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Pdlim3O70209 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.94□□□□□ -0.02
Pdlim3O70209 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pdlim3O70209 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.94□□□□□ -0.02
Pdlim3O70209 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.94□□□□□ -0.02
Pdlim3O70209 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pdlim3O70209 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pdlim3O70209 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pdlim3O70209 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pdlim3O70209 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pdlim3O70209 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pdlim3O70209 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pdlim3O70209 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pdlim3O70209 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Pdlim3O70209 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pdlim3O70209 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pdlim3O70209 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.94□□□□□ -0.02
Pdlim3O70209 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pdlim3O70209 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Pdlim3O70209 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.93□□□□□ -0.02
Pdlim3O70209 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pdlim3O70209 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pdlim3O70209 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pdlim3O70209 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.93□□□□□ -0.02
Pdlim3O70209 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pdlim3O70209 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pdlim3O70209 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pdlim3O70209 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
Pdlim3O70209 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pdlim3O70209 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.93□□□□□ -0.02
Pdlim3O70209 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pdlim3O70209 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pdlim3O70209 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pdlim3O70209 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pdlim3O70209 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pdlim3O70209 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pdlim3O70209 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pdlim3O70209 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pdlim3O70209 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Pdlim3O70209 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pdlim3O70209 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pdlim3O70209 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pdlim3O70209 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pdlim3O70209 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pdlim3O70209 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pdlim3O70209 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pdlim3O70209 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pdlim3O70209 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Pdlim3O70209 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pdlim3O70209 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pdlim3O70209 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
Pdlim3O70209 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.92□□□□□ -0.02
Pdlim3O70209 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pdlim3O70209 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Pdlim3O70209 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Pdlim3O70209 Gm7638-201ENSMUST00000121348 967 ntBASIC14.92□□□□□ -0.02
Pdlim3O70209 Gm18958-201ENSMUST00000174258 762 ntBASIC14.92□□□□□ -0.02
Pdlim3O70209 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pdlim3O70209 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pdlim3O70209 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pdlim3O70209 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pdlim3O70209 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pdlim3O70209 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pdlim3O70209 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pdlim3O70209 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pdlim3O70209 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pdlim3O70209 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pdlim3O70209 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pdlim3O70209 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pdlim3O70209 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pdlim3O70209 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Pdlim3O70209 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pdlim3O70209 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pdlim3O70209 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC14.91□□□□□ -0.02
Pdlim3O70209 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms