Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Alx3O70137 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Alx3O70137 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Alx3O70137 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Alx3O70137 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Alx3O70137 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Alx3O70137 Gm45691-201ENSMUST00000206905 1120 ntBASIC14.96□□□□□ -0.01
Alx3O70137 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Alx3O70137 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Alx3O70137 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Alx3O70137 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Alx3O70137 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Alx3O70137 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Alx3O70137 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Alx3O70137 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Alx3O70137 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.96□□□□□ -0.02
Alx3O70137 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Alx3O70137 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Alx3O70137 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Alx3O70137 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Alx3O70137 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Alx3O70137 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Alx3O70137 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
Alx3O70137 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Alx3O70137 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Alx3O70137 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Alx3O70137 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Alx3O70137 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.95□□□□□ -0.02
Alx3O70137 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Alx3O70137 AC154532.1-201ENSMUST00000227860 965 ntBASIC14.95□□□□□ -0.02
Alx3O70137 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Alx3O70137 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Alx3O70137 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Alx3O70137 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Alx3O70137 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Alx3O70137 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
Alx3O70137 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Alx3O70137 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Alx3O70137 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Alx3O70137 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Alx3O70137 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Alx3O70137 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Alx3O70137 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Alx3O70137 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Alx3O70137 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Alx3O70137 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.94□□□□□ -0.02
Alx3O70137 Gm715-201ENSMUST00000117865 831 ntBASIC14.94□□□□□ -0.02
Alx3O70137 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.94□□□□□ -0.02
Alx3O70137 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC14.94□□□□□ -0.02
Alx3O70137 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Alx3O70137 Gm3375-201ENSMUST00000203929 796 ntBASIC14.94□□□□□ -0.02
Alx3O70137 Gm7791-201ENSMUST00000219066 539 ntBASIC14.94□□□□□ -0.02
Alx3O70137 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Alx3O70137 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Alx3O70137 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Alx3O70137 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Alx3O70137 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Alx3O70137 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Alx3O70137 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Alx3O70137 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Alx3O70137 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Alx3O70137 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Alx3O70137 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Alx3O70137 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Alx3O70137 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Alx3O70137 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Alx3O70137 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Alx3O70137 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Alx3O70137 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Alx3O70137 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Alx3O70137 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Alx3O70137 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Alx3O70137 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.93□□□□□ -0.02
Alx3O70137 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Alx3O70137 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Alx3O70137 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Alx3O70137 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Alx3O70137 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Alx3O70137 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Alx3O70137 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.93□□□□□ -0.02
Alx3O70137 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.93□□□□□ -0.02
Alx3O70137 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Alx3O70137 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Alx3O70137 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Alx3O70137 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC14.93□□□□□ -0.02
Alx3O70137 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Alx3O70137 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC14.93□□□□□ -0.02
Alx3O70137 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Alx3O70137 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Alx3O70137 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Alx3O70137 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Alx3O70137 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Alx3O70137 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Alx3O70137 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Alx3O70137 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Alx3O70137 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Alx3O70137 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Alx3O70137 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Alx3O70137 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Alx3O70137 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms