Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Gm6345-202ENSMUST00000180900 204 ntBASIC12.28□□□□□ -0.44
Rpl35aO55142 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpl35aO55142 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpl35aO55142 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpl35aO55142 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Rpl35aO55142 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rpl35aO55142 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Rpl35aO55142 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rpl35aO55142 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rpl35aO55142 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpl35aO55142 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Rpl35aO55142 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rpl35aO55142 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Rpl35aO55142 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rpl35aO55142 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rpl35aO55142 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC12.27□□□□□ -0.44
Rpl35aO55142 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rpl35aO55142 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rpl35aO55142 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Rpl35aO55142 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Rpl35aO55142 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
Rpl35aO55142 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rpl35aO55142 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rpl35aO55142 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC12.27□□□□□ -0.45
Rpl35aO55142 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Rpl35aO55142 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC12.27□□□□□ -0.45
Rpl35aO55142 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC12.27□□□□□ -0.45
Rpl35aO55142 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC12.27□□□□□ -0.45
Rpl35aO55142 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
Rpl35aO55142 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC12.27□□□□□ -0.45
Rpl35aO55142 AC122351.1-201ENSMUST00000220467 126 ntBASIC12.27□□□□□ -0.45
Rpl35aO55142 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rpl35aO55142 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rpl35aO55142 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rpl35aO55142 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rpl35aO55142 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Rpl35aO55142 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rpl35aO55142 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rpl35aO55142 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Rpl35aO55142 Tfap2a-209ENSMUST00000225180 1828 ntBASIC12.27□□□□□ -0.45
Rpl35aO55142 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Rpl35aO55142 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Rpl35aO55142 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rpl35aO55142 Phf7-203ENSMUST00000226565 1971 ntBASIC12.27□□□□□ -0.45
Rpl35aO55142 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rpl35aO55142 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rpl35aO55142 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rpl35aO55142 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl35aO55142 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl35aO55142 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Rpl35aO55142 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl35aO55142 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Rpl35aO55142 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl35aO55142 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl35aO55142 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl35aO55142 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl35aO55142 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl35aO55142 Gm14859-201ENSMUST00000117752 357 ntBASIC12.26□□□□□ -0.45
Rpl35aO55142 Gm9013-201ENSMUST00000132939 882 ntBASIC12.26□□□□□ -0.45
Rpl35aO55142 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC12.26□□□□□ -0.45
Rpl35aO55142 Gm37722-201ENSMUST00000193757 208 ntBASIC12.26□□□□□ -0.45
Rpl35aO55142 Gm5587-201ENSMUST00000206270 674 ntBASIC12.26□□□□□ -0.45
Rpl35aO55142 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Rpl35aO55142 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC12.26□□□□□ -0.45
Rpl35aO55142 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl35aO55142 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl35aO55142 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl35aO55142 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl35aO55142 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Rpl35aO55142 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl35aO55142 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl35aO55142 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl35aO55142 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl35aO55142 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl35aO55142 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpl35aO55142 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpl35aO55142 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Rpl35aO55142 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpl35aO55142 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rpl35aO55142 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rpl35aO55142 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpl35aO55142 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpl35aO55142 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Rpl35aO55142 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpl35aO55142 Gm11336-201ENSMUST00000118168 334 ntBASIC12.25□□□□□ -0.45
Rpl35aO55142 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC12.25□□□□□ -0.45
Rpl35aO55142 Gm6623-201ENSMUST00000173570 544 ntBASIC12.25□□□□□ -0.45
Rpl35aO55142 Gm21362-201ENSMUST00000194272 928 ntBASIC12.25□□□□□ -0.45
Rpl35aO55142 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpl35aO55142 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpl35aO55142 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rpl35aO55142 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Rpl35aO55142 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpl35aO55142 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rpl35aO55142 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpl35aO55142 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpl35aO55142 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Rpl35aO55142 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpl35aO55142 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpl35aO55142 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms