Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Trdmt1O55055 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trdmt1O55055 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trdmt1O55055 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trdmt1O55055 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trdmt1O55055 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trdmt1O55055 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trdmt1O55055 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
Trdmt1O55055 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.49
Trdmt1O55055 Gm15467-201ENSMUST00000120582 445 ntBASIC18.08■□□□□ 0.48
Trdmt1O55055 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC18.08■□□□□ 0.48
Trdmt1O55055 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Trdmt1O55055 Gm6550-201ENSMUST00000187574 993 ntBASIC18.08■□□□□ 0.48
Trdmt1O55055 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC18.08■□□□□ 0.48
Trdmt1O55055 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trdmt1O55055 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trdmt1O55055 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trdmt1O55055 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trdmt1O55055 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trdmt1O55055 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trdmt1O55055 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trdmt1O55055 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trdmt1O55055 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.07■□□□□ 0.48
Trdmt1O55055 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Trdmt1O55055 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trdmt1O55055 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Trdmt1O55055 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Trdmt1O55055 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.07■□□□□ 0.48
Trdmt1O55055 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trdmt1O55055 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trdmt1O55055 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trdmt1O55055 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Trdmt1O55055 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Trdmt1O55055 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trdmt1O55055 AC154222.1-201ENSMUST00000223882 475 ntBASIC18.07■□□□□ 0.48
Trdmt1O55055 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC18.07■□□□□ 0.48
Trdmt1O55055 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trdmt1O55055 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trdmt1O55055 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
Trdmt1O55055 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trdmt1O55055 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trdmt1O55055 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trdmt1O55055 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC18.06■□□□□ 0.48
Trdmt1O55055 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trdmt1O55055 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trdmt1O55055 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trdmt1O55055 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trdmt1O55055 Gm25406-201ENSMUST00000157599 105 ntBASIC18.06■□□□□ 0.48
Trdmt1O55055 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Trdmt1O55055 Gm2213-201ENSMUST00000197485 688 ntBASIC18.06■□□□□ 0.48
Trdmt1O55055 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trdmt1O55055 Gm42670-201ENSMUST00000201816 1292 ntBASIC18.06■□□□□ 0.48
Trdmt1O55055 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trdmt1O55055 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trdmt1O55055 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trdmt1O55055 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trdmt1O55055 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trdmt1O55055 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trdmt1O55055 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trdmt1O55055 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trdmt1O55055 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trdmt1O55055 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trdmt1O55055 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trdmt1O55055 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trdmt1O55055 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trdmt1O55055 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trdmt1O55055 Gm5837-201ENSMUST00000191844 1369 ntBASIC18.05■□□□□ 0.48
Trdmt1O55055 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Trdmt1O55055 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Trdmt1O55055 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trdmt1O55055 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trdmt1O55055 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trdmt1O55055 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trdmt1O55055 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Trdmt1O55055 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trdmt1O55055 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
Trdmt1O55055 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trdmt1O55055 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trdmt1O55055 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trdmt1O55055 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trdmt1O55055 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trdmt1O55055 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trdmt1O55055 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trdmt1O55055 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trdmt1O55055 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trdmt1O55055 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Trdmt1O55055 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC18.04■□□□□ 0.48
Trdmt1O55055 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC18.04■□□□□ 0.48
Trdmt1O55055 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trdmt1O55055 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trdmt1O55055 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trdmt1O55055 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trdmt1O55055 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trdmt1O55055 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trdmt1O55055 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC18.04■□□□□ 0.48
Trdmt1O55055 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Trdmt1O55055 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Trdmt1O55055 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trdmt1O55055 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trdmt1O55055 Gm37500-201ENSMUST00000192059 1443 ntBASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms