Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SncaO55042 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SncaO55042 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SncaO55042 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC13.64□□□□□ -0.23
SncaO55042 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SncaO55042 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
SncaO55042 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SncaO55042 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SncaO55042 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC13.64□□□□□ -0.23
SncaO55042 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SncaO55042 Gm12085-201ENSMUST00000119263 940 ntBASIC13.64□□□□□ -0.23
SncaO55042 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SncaO55042 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SncaO55042 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SncaO55042 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SncaO55042 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SncaO55042 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SncaO55042 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SncaO55042 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SncaO55042 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC13.64□□□□□ -0.23
SncaO55042 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SncaO55042 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.64□□□□□ -0.23
SncaO55042 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SncaO55042 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SncaO55042 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
SncaO55042 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SncaO55042 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SncaO55042 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SncaO55042 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SncaO55042 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SncaO55042 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SncaO55042 Gm12527-201ENSMUST00000117967 564 ntBASIC13.63□□□□□ -0.23
SncaO55042 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
SncaO55042 Gm18958-201ENSMUST00000174258 762 ntBASIC13.63□□□□□ -0.23
SncaO55042 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SncaO55042 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC13.63□□□□□ -0.23
SncaO55042 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SncaO55042 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SncaO55042 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SncaO55042 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SncaO55042 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SncaO55042 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SncaO55042 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
SncaO55042 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SncaO55042 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SncaO55042 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SncaO55042 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SncaO55042 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SncaO55042 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SncaO55042 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SncaO55042 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.62□□□□□ -0.23
SncaO55042 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SncaO55042 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
SncaO55042 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
SncaO55042 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SncaO55042 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SncaO55042 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SncaO55042 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SncaO55042 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SncaO55042 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SncaO55042 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SncaO55042 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SncaO55042 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SncaO55042 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SncaO55042 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SncaO55042 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SncaO55042 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SncaO55042 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
SncaO55042 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SncaO55042 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SncaO55042 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SncaO55042 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
SncaO55042 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SncaO55042 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.62□□□□□ -0.23
SncaO55042 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SncaO55042 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SncaO55042 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.62□□□□□ -0.23
SncaO55042 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SncaO55042 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
SncaO55042 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SncaO55042 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SncaO55042 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SncaO55042 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SncaO55042 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SncaO55042 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC13.61□□□□□ -0.23
SncaO55042 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC13.61□□□□□ -0.23
SncaO55042 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SncaO55042 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
SncaO55042 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SncaO55042 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SncaO55042 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.61□□□□□ -0.23
SncaO55042 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
SncaO55042 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
SncaO55042 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
SncaO55042 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SncaO55042 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.6□□□□□ -0.23
SncaO55042 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC13.6□□□□□ -0.23
SncaO55042 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SncaO55042 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SncaO55042 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms