Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
Prom1O54990 Gm11779-201ENSMUST00000118541 368 ntBASIC18.1■□□□□ 0.49
Prom1O54990 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC18.1■□□□□ 0.49
Prom1O54990 Gm4535-201ENSMUST00000182274 558 ntBASIC18.1■□□□□ 0.49
Prom1O54990 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Prom1O54990 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC18.1■□□□□ 0.49
Prom1O54990 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Prom1O54990 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Prom1O54990 Gm10355-201ENSMUST00000097146 517 ntBASIC18.1■□□□□ 0.49
Prom1O54990 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Prom1O54990 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Prom1O54990 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Prom1O54990 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Prom1O54990 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Prom1O54990 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Prom1O54990 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Prom1O54990 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Prom1O54990 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Prom1O54990 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Prom1O54990 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Prom1O54990 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Prom1O54990 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Prom1O54990 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Prom1O54990 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Prom1O54990 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC18.09■□□□□ 0.49
Prom1O54990 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC18.09■□□□□ 0.49
Prom1O54990 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Prom1O54990 Gm37584-201ENSMUST00000193595 1290 ntBASIC18.09■□□□□ 0.49
Prom1O54990 Gm15590-201ENSMUST00000078419 552 ntBASIC18.09■□□□□ 0.49
Prom1O54990 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Prom1O54990 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Prom1O54990 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Prom1O54990 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
Prom1O54990 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Prom1O54990 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Prom1O54990 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Prom1O54990 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Prom1O54990 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Prom1O54990 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Prom1O54990 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Prom1O54990 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Prom1O54990 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Prom1O54990 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Prom1O54990 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Prom1O54990 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.08■□□□□ 0.48
Prom1O54990 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC18.08■□□□□ 0.48
Prom1O54990 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Prom1O54990 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC18.08■□□□□ 0.48
Prom1O54990 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Prom1O54990 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Prom1O54990 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Prom1O54990 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Prom1O54990 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Prom1O54990 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Prom1O54990 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Prom1O54990 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Prom1O54990 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Prom1O54990 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Prom1O54990 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Prom1O54990 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Prom1O54990 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Prom1O54990 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Prom1O54990 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Prom1O54990 Gm8097-201ENSMUST00000117903 829 ntBASIC18.07■□□□□ 0.48
Prom1O54990 Gm4459-201ENSMUST00000118750 468 ntBASIC18.07■□□□□ 0.48
Prom1O54990 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC18.07■□□□□ 0.48
Prom1O54990 Gm8000-201ENSMUST00000188378 592 ntBASIC18.07■□□□□ 0.48
Prom1O54990 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Prom1O54990 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Prom1O54990 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Prom1O54990 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Prom1O54990 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Prom1O54990 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Prom1O54990 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Prom1O54990 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Prom1O54990 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Prom1O54990 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Prom1O54990 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Prom1O54990 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC18.06■□□□□ 0.48
Prom1O54990 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Prom1O54990 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Prom1O54990 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Prom1O54990 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Prom1O54990 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC18.06■□□□□ 0.48
Prom1O54990 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Prom1O54990 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Prom1O54990 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Prom1O54990 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC18.06■□□□□ 0.48
Prom1O54990 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Prom1O54990 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Prom1O54990 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Prom1O54990 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Prom1O54990 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Prom1O54990 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
Prom1O54990 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Prom1O54990 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Prom1O54990 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Prom1O54990 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Prom1O54990 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Prom1O54990 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms