Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
DffbO54788 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
DffbO54788 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
DffbO54788 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
DffbO54788 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.16□□□□□ -0.14
DffbO54788 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
DffbO54788 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
DffbO54788 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
DffbO54788 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.16□□□□□ -0.14
DffbO54788 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
DffbO54788 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
DffbO54788 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
DffbO54788 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
DffbO54788 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DffbO54788 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
DffbO54788 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
DffbO54788 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DffbO54788 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.15□□□□□ -0.14
DffbO54788 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
DffbO54788 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
DffbO54788 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
DffbO54788 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
DffbO54788 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
DffbO54788 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.15□□□□□ -0.14
DffbO54788 Gm9731-201ENSMUST00000209480 747 ntBASIC14.15□□□□□ -0.14
DffbO54788 AC135637.1-201ENSMUST00000227750 365 ntBASIC14.15□□□□□ -0.14
DffbO54788 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DffbO54788 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DffbO54788 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DffbO54788 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DffbO54788 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.15□□□□□ -0.14
DffbO54788 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
DffbO54788 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DffbO54788 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
DffbO54788 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DffbO54788 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DffbO54788 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.15□□□□□ -0.14
DffbO54788 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.15□□□□□ -0.14
DffbO54788 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DffbO54788 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
DffbO54788 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DffbO54788 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DffbO54788 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
DffbO54788 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
DffbO54788 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
DffbO54788 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
DffbO54788 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
DffbO54788 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
DffbO54788 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
DffbO54788 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
DffbO54788 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
DffbO54788 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
DffbO54788 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
DffbO54788 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
DffbO54788 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
DffbO54788 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
DffbO54788 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
DffbO54788 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
DffbO54788 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
DffbO54788 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
DffbO54788 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
DffbO54788 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
DffbO54788 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
DffbO54788 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
DffbO54788 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
DffbO54788 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
DffbO54788 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
DffbO54788 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
DffbO54788 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.13□□□□□ -0.15
DffbO54788 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
DffbO54788 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
DffbO54788 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.13□□□□□ -0.15
DffbO54788 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
DffbO54788 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
DffbO54788 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
DffbO54788 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
DffbO54788 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
DffbO54788 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
DffbO54788 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
DffbO54788 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
DffbO54788 Gm7638-201ENSMUST00000121348 967 ntBASIC14.13□□□□□ -0.15
DffbO54788 Gm15378-201ENSMUST00000121894 207 ntBASIC14.13□□□□□ -0.15
DffbO54788 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.13□□□□□ -0.15
DffbO54788 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
DffbO54788 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
DffbO54788 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
DffbO54788 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
DffbO54788 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
DffbO54788 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
DffbO54788 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
DffbO54788 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
DffbO54788 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
DffbO54788 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
DffbO54788 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
DffbO54788 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.13□□□□□ -0.15
DffbO54788 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
DffbO54788 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
DffbO54788 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DffbO54788 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
DffbO54788 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms