Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Limk2O54785 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Limk2O54785 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Limk2O54785 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.69■□□□□ 0.26
Limk2O54785 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Limk2O54785 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.69■□□□□ 0.26
Limk2O54785 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.69■□□□□ 0.26
Limk2O54785 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
Limk2O54785 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Limk2O54785 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Limk2O54785 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Limk2O54785 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Limk2O54785 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Limk2O54785 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Limk2O54785 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Limk2O54785 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Limk2O54785 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Limk2O54785 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Limk2O54785 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Limk2O54785 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Limk2O54785 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Limk2O54785 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Limk2O54785 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Limk2O54785 Gm27742-201ENSMUST00000184667 60 ntBASIC16.68■□□□□ 0.26
Limk2O54785 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Limk2O54785 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Limk2O54785 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Limk2O54785 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.68■□□□□ 0.26
Limk2O54785 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.68■□□□□ 0.26
Limk2O54785 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Limk2O54785 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Limk2O54785 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Limk2O54785 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Limk2O54785 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Limk2O54785 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.68■□□□□ 0.26
Limk2O54785 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
Limk2O54785 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Limk2O54785 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Limk2O54785 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Limk2O54785 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Limk2O54785 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Limk2O54785 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Limk2O54785 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Limk2O54785 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Limk2O54785 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.67■□□□□ 0.26
Limk2O54785 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.67■□□□□ 0.26
Limk2O54785 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Limk2O54785 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.67■□□□□ 0.26
Limk2O54785 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.67■□□□□ 0.26
Limk2O54785 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.67■□□□□ 0.26
Limk2O54785 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Limk2O54785 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Limk2O54785 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Limk2O54785 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Limk2O54785 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Limk2O54785 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Limk2O54785 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Limk2O54785 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Limk2O54785 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Limk2O54785 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Limk2O54785 Mir770-201ENSMUST00000103252 94 ntBASIC16.66■□□□□ 0.26
Limk2O54785 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Limk2O54785 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.66■□□□□ 0.26
Limk2O54785 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.66■□□□□ 0.26
Limk2O54785 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.66■□□□□ 0.26
Limk2O54785 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Limk2O54785 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Limk2O54785 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.66■□□□□ 0.26
Limk2O54785 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
Limk2O54785 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Limk2O54785 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Limk2O54785 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Limk2O54785 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Limk2O54785 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Limk2O54785 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Limk2O54785 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Limk2O54785 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Limk2O54785 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Limk2O54785 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Limk2O54785 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Limk2O54785 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Limk2O54785 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Limk2O54785 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Limk2O54785 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Limk2O54785 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Limk2O54785 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Limk2O54785 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.65■□□□□ 0.26
Limk2O54785 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Limk2O54785 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Limk2O54785 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Limk2O54785 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Limk2O54785 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Limk2O54785 Gm44771-201ENSMUST00000206975 626 ntBASIC16.65■□□□□ 0.26
Limk2O54785 Gm45328-201ENSMUST00000210942 917 ntBASIC16.65■□□□□ 0.26
Limk2O54785 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Limk2O54785 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.65■□□□□ 0.26
Limk2O54785 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Limk2O54785 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Limk2O54785 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Limk2O54785 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms