Protein–RNA interactions for Protein: O35973

Per1, Period circadian protein homolog 1, mousemouse

Predictions only

Length 1,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per1O35973 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Per1O35973 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.81■□□□□ 0.44
Per1O35973 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Per1O35973 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Per1O35973 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Per1O35973 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Per1O35973 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Per1O35973 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Per1O35973 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.8■□□□□ 0.44
Per1O35973 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Per1O35973 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Per1O35973 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Per1O35973 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.8■□□□□ 0.44
Per1O35973 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Per1O35973 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Per1O35973 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Per1O35973 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Per1O35973 Gm7153-201ENSMUST00000117092 455 ntBASIC17.8■□□□□ 0.44
Per1O35973 Gm15165-201ENSMUST00000118140 502 ntBASIC17.8■□□□□ 0.44
Per1O35973 Mir6404-201ENSMUST00000183699 94 ntBASIC17.8■□□□□ 0.44
Per1O35973 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.8■□□□□ 0.44
Per1O35973 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Per1O35973 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Per1O35973 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Per1O35973 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Per1O35973 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.8■□□□□ 0.44
Per1O35973 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Per1O35973 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
Per1O35973 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Per1O35973 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Per1O35973 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Per1O35973 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Per1O35973 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.8■□□□□ 0.44
Per1O35973 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Per1O35973 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Per1O35973 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.79■□□□□ 0.44
Per1O35973 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Per1O35973 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Per1O35973 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Per1O35973 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Per1O35973 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Per1O35973 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Per1O35973 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Per1O35973 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Per1O35973 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Per1O35973 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.79■□□□□ 0.44
Per1O35973 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Per1O35973 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Per1O35973 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Per1O35973 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Per1O35973 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.79■□□□□ 0.44
Per1O35973 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Per1O35973 Haglr-201ENSMUST00000100000 2085 ntBASIC17.79■□□□□ 0.44
Per1O35973 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Per1O35973 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Per1O35973 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Per1O35973 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Per1O35973 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Per1O35973 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Per1O35973 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Per1O35973 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Per1O35973 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17.78■□□□□ 0.44
Per1O35973 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.78■□□□□ 0.44
Per1O35973 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.78■□□□□ 0.44
Per1O35973 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.78■□□□□ 0.44
Per1O35973 Gm27459-201ENSMUST00000184860 107 ntBASIC17.78■□□□□ 0.44
Per1O35973 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
Per1O35973 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Per1O35973 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Per1O35973 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Per1O35973 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Per1O35973 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Per1O35973 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Per1O35973 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Per1O35973 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Per1O35973 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Per1O35973 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Per1O35973 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Per1O35973 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Per1O35973 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Per1O35973 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Per1O35973 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.77■□□□□ 0.44
Per1O35973 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Per1O35973 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
Per1O35973 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.77■□□□□ 0.44
Per1O35973 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Per1O35973 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
Per1O35973 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.77■□□□□ 0.44
Per1O35973 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Per1O35973 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Per1O35973 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Per1O35973 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Per1O35973 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Per1O35973 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Per1O35973 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Per1O35973 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Per1O35973 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Per1O35973 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Per1O35973 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Per1O35973 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms