Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lsm2O35900 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lsm2O35900 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lsm2O35900 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lsm2O35900 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Lsm2O35900 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lsm2O35900 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.7□□□□□ -0.06
Lsm2O35900 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lsm2O35900 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lsm2O35900 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm2O35900 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm2O35900 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Lsm2O35900 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm2O35900 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm2O35900 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm2O35900 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm2O35900 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm2O35900 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm2O35900 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.69□□□□□ -0.06
Lsm2O35900 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm2O35900 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Lsm2O35900 Gm43859-201ENSMUST00000200075 1412 ntBASIC14.69□□□□□ -0.06
Lsm2O35900 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm2O35900 Gm13158-201ENSMUST00000122007 736 ntBASIC14.69□□□□□ -0.06
Lsm2O35900 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm2O35900 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm2O35900 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm2O35900 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm2O35900 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC14.69□□□□□ -0.06
Lsm2O35900 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm2O35900 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm2O35900 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm2O35900 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm2O35900 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.69□□□□□ -0.06
Lsm2O35900 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm2O35900 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm2O35900 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lsm2O35900 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm2O35900 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm2O35900 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm2O35900 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm2O35900 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Lsm2O35900 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm2O35900 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm2O35900 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm2O35900 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm2O35900 Gm9694-201ENSMUST00000193347 1189 ntBASIC14.68□□□□□ -0.06
Lsm2O35900 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC14.68□□□□□ -0.06
Lsm2O35900 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm2O35900 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm2O35900 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.68□□□□□ -0.06
Lsm2O35900 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm2O35900 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm2O35900 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm2O35900 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Lsm2O35900 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm2O35900 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.68□□□□□ -0.06
Lsm2O35900 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm2O35900 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm2O35900 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm2O35900 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm2O35900 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm2O35900 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm2O35900 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lsm2O35900 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.67□□□□□ -0.06
Lsm2O35900 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lsm2O35900 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Lsm2O35900 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lsm2O35900 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lsm2O35900 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.67□□□□□ -0.06
Lsm2O35900 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lsm2O35900 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lsm2O35900 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lsm2O35900 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Lsm2O35900 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lsm2O35900 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lsm2O35900 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lsm2O35900 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lsm2O35900 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Lsm2O35900 Gm12896-201ENSMUST00000118430 226 ntBASIC14.67□□□□□ -0.06
Lsm2O35900 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.67□□□□□ -0.06
Lsm2O35900 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lsm2O35900 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lsm2O35900 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Lsm2O35900 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lsm2O35900 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Lsm2O35900 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lsm2O35900 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Lsm2O35900 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Lsm2O35900 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Lsm2O35900 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.67□□□□□ -0.06
Lsm2O35900 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lsm2O35900 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Lsm2O35900 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.66□□□□□ -0.06
Lsm2O35900 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Lsm2O35900 App-207ENSMUST00000227737 2827 ntBASIC14.66□□□□□ -0.06
Lsm2O35900 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Lsm2O35900 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lsm2O35900 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lsm2O35900 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms