Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC15.4■□□□□ 0.06
Abca4O35600 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Abca4O35600 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Abca4O35600 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Abca4O35600 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Abca4O35600 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Abca4O35600 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC15.4■□□□□ 0.06
Abca4O35600 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Abca4O35600 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Abca4O35600 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Abca4O35600 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Abca4O35600 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Abca4O35600 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Abca4O35600 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Abca4O35600 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC15.4■□□□□ 0.06
Abca4O35600 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Abca4O35600 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Abca4O35600 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Abca4O35600 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.4■□□□□ 0.06
Abca4O35600 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Abca4O35600 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Abca4O35600 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Abca4O35600 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Abca4O35600 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Abca4O35600 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Abca4O35600 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Abca4O35600 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Abca4O35600 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.4■□□□□ 0.06
Abca4O35600 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Abca4O35600 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Abca4O35600 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Abca4O35600 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Abca4O35600 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Abca4O35600 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Abca4O35600 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Abca4O35600 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Abca4O35600 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC15.39■□□□□ 0.05
Abca4O35600 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC15.39■□□□□ 0.05
Abca4O35600 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Abca4O35600 Gm4899-201ENSMUST00000178708 719 ntBASIC15.39■□□□□ 0.05
Abca4O35600 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Abca4O35600 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Abca4O35600 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Abca4O35600 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.39■□□□□ 0.05
Abca4O35600 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
Abca4O35600 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Abca4O35600 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Abca4O35600 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Abca4O35600 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Abca4O35600 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Abca4O35600 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Abca4O35600 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Abca4O35600 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Abca4O35600 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Abca4O35600 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC15.39■□□□□ 0.05
Abca4O35600 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.39■□□□□ 0.05
Abca4O35600 Gm44719-201ENSMUST00000206404 149 ntBASIC15.39■□□□□ 0.05
Abca4O35600 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Abca4O35600 Gm9899-201ENSMUST00000065519 555 ntBASIC15.39■□□□□ 0.05
Abca4O35600 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Abca4O35600 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Abca4O35600 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Abca4O35600 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Abca4O35600 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Abca4O35600 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Abca4O35600 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Abca4O35600 Gm10616-201ENSMUST00000205285 2127 ntBASIC15.38■□□□□ 0.05
Abca4O35600 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Abca4O35600 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.38■□□□□ 0.05
Abca4O35600 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Abca4O35600 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Abca4O35600 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Abca4O35600 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Abca4O35600 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Abca4O35600 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Abca4O35600 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Abca4O35600 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Abca4O35600 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Abca4O35600 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Abca4O35600 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Abca4O35600 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.38■□□□□ 0.05
Abca4O35600 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Abca4O35600 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
Abca4O35600 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Abca4O35600 Mir7085-201ENSMUST00000184353 66 ntBASIC15.38■□□□□ 0.05
Abca4O35600 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Abca4O35600 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Abca4O35600 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Abca4O35600 Hsf1-207ENSMUST00000228371 2102 ntBASIC15.38■□□□□ 0.05
Abca4O35600 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Abca4O35600 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Abca4O35600 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Abca4O35600 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Abca4O35600 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Abca4O35600 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
Abca4O35600 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Abca4O35600 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Abca4O35600 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15.37■□□□□ 0.05
Abca4O35600 Gm7774-201ENSMUST00000200064 533 ntBASIC15.37■□□□□ 0.05
Abca4O35600 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms