Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfsf11O35235 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfsf11O35235 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfsf11O35235 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Tnfsf11O35235 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfsf11O35235 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfsf11O35235 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Tnfsf11O35235 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC12.89□□□□□ -0.35
Tnfsf11O35235 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC12.89□□□□□ -0.35
Tnfsf11O35235 Gm15847-201ENSMUST00000121417 1065 ntBASIC12.89□□□□□ -0.35
Tnfsf11O35235 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfsf11O35235 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Tnfsf11O35235 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC12.89□□□□□ -0.35
Tnfsf11O35235 Gm10138-203ENSMUST00000206952 366 ntBASIC12.89□□□□□ -0.35
Tnfsf11O35235 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfsf11O35235 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfsf11O35235 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfsf11O35235 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC12.89□□□□□ -0.35
Tnfsf11O35235 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfsf11O35235 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfsf11O35235 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Tnfsf11O35235 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Tnfsf11O35235 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC12.89□□□□□ -0.35
Tnfsf11O35235 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfsf11O35235 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfsf11O35235 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Tnfsf11O35235 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfsf11O35235 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfsf11O35235 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfsf11O35235 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfsf11O35235 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfsf11O35235 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfsf11O35235 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfsf11O35235 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfsf11O35235 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfsf11O35235 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfsf11O35235 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfsf11O35235 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfsf11O35235 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC12.88□□□□□ -0.35
Tnfsf11O35235 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfsf11O35235 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfsf11O35235 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfsf11O35235 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfsf11O35235 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Tnfsf11O35235 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfsf11O35235 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfsf11O35235 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfsf11O35235 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfsf11O35235 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfsf11O35235 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfsf11O35235 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfsf11O35235 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfsf11O35235 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfsf11O35235 AL590614.2-201ENSMUST00000225374 1937 ntBASIC12.88□□□□□ -0.35
Tnfsf11O35235 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfsf11O35235 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfsf11O35235 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfsf11O35235 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfsf11O35235 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfsf11O35235 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Tnfsf11O35235 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfsf11O35235 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfsf11O35235 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfsf11O35235 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfsf11O35235 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfsf11O35235 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC12.87□□□□□ -0.35
Tnfsf11O35235 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfsf11O35235 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfsf11O35235 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC12.87□□□□□ -0.35
Tnfsf11O35235 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfsf11O35235 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfsf11O35235 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfsf11O35235 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfsf11O35235 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfsf11O35235 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfsf11O35235 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfsf11O35235 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfsf11O35235 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Tnfsf11O35235 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfsf11O35235 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfsf11O35235 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfsf11O35235 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfsf11O35235 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfsf11O35235 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfsf11O35235 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfsf11O35235 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfsf11O35235 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.86□□□□□ -0.35
Tnfsf11O35235 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfsf11O35235 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC12.86□□□□□ -0.35
Tnfsf11O35235 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfsf11O35235 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfsf11O35235 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfsf11O35235 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.86□□□□□ -0.35
Tnfsf11O35235 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC12.86□□□□□ -0.35
Tnfsf11O35235 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Tnfsf11O35235 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Tnfsf11O35235 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC12.86□□□□□ -0.35
Tnfsf11O35235 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfsf11O35235 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfsf11O35235 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms