Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col15a1O35206 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC21.04■□□□□ 0.96
Col15a1O35206 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col15a1O35206 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC21.04■□□□□ 0.96
Col15a1O35206 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col15a1O35206 Gm27397-201ENSMUST00000184997 107 ntBASIC21.04■□□□□ 0.96
Col15a1O35206 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC21.04■□□□□ 0.96
Col15a1O35206 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC21.04■□□□□ 0.96
Col15a1O35206 Gm45683-201ENSMUST00000210825 1247 ntBASIC21.04■□□□□ 0.96
Col15a1O35206 AC154621.1-201ENSMUST00000226155 1119 ntBASIC21.04■□□□□ 0.96
Col15a1O35206 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC21.04■□□□□ 0.96
Col15a1O35206 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col15a1O35206 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Col15a1O35206 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC21.04■□□□□ 0.96
Col15a1O35206 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col15a1O35206 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col15a1O35206 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC21.04■□□□□ 0.96
Col15a1O35206 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col15a1O35206 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col15a1O35206 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Col15a1O35206 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col15a1O35206 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Col15a1O35206 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Col15a1O35206 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC21.03■□□□□ 0.96
Col15a1O35206 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC21.03■□□□□ 0.96
Col15a1O35206 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC21.03■□□□□ 0.96
Col15a1O35206 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Col15a1O35206 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC21.03■□□□□ 0.96
Col15a1O35206 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col15a1O35206 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col15a1O35206 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Col15a1O35206 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col15a1O35206 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col15a1O35206 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col15a1O35206 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Col15a1O35206 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC21.02■□□□□ 0.96
Col15a1O35206 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Col15a1O35206 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col15a1O35206 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col15a1O35206 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col15a1O35206 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
Col15a1O35206 Gm43182-201ENSMUST00000199476 2528 ntBASIC21.01■□□□□ 0.95
Col15a1O35206 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Col15a1O35206 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC21.01■□□□□ 0.95
Col15a1O35206 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC21.01■□□□□ 0.95
Col15a1O35206 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Col15a1O35206 Gm18622-201ENSMUST00000219361 595 ntBASIC21.01■□□□□ 0.95
Col15a1O35206 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col15a1O35206 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Col15a1O35206 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Col15a1O35206 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col15a1O35206 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC21■□□□□ 0.95
Col15a1O35206 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC21■□□□□ 0.95
Col15a1O35206 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC21■□□□□ 0.95
Col15a1O35206 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC21■□□□□ 0.95
Col15a1O35206 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC21■□□□□ 0.95
Col15a1O35206 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Col15a1O35206 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col15a1O35206 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col15a1O35206 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC21■□□□□ 0.95
Col15a1O35206 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col15a1O35206 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col15a1O35206 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col15a1O35206 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC21■□□□□ 0.95
Col15a1O35206 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col15a1O35206 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Col15a1O35206 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Col15a1O35206 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col15a1O35206 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC20.99■□□□□ 0.95
Col15a1O35206 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Col15a1O35206 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC20.99■□□□□ 0.95
Col15a1O35206 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col15a1O35206 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col15a1O35206 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Col15a1O35206 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Col15a1O35206 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Col15a1O35206 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Col15a1O35206 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col15a1O35206 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col15a1O35206 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Col15a1O35206 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC20.98■□□□□ 0.95
Col15a1O35206 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col15a1O35206 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col15a1O35206 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Col15a1O35206 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Col15a1O35206 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Col15a1O35206 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Col15a1O35206 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Col15a1O35206 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Col15a1O35206 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Col15a1O35206 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Col15a1O35206 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col15a1O35206 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Col15a1O35206 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col15a1O35206 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Col15a1O35206 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Col15a1O35206 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC20.97■□□□□ 0.95
Col15a1O35206 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col15a1O35206 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Col15a1O35206 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms