Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Ercc2O08811 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Ercc2O08811 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.86■□□□□ 0.29
Ercc2O08811 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ercc2O08811 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ercc2O08811 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ercc2O08811 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ercc2O08811 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ercc2O08811 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ercc2O08811 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ercc2O08811 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.85■□□□□ 0.29
Ercc2O08811 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ercc2O08811 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.85■□□□□ 0.29
Ercc2O08811 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ercc2O08811 Gm23634-201ENSMUST00000175071 91 ntBASIC16.85■□□□□ 0.29
Ercc2O08811 Gm5587-201ENSMUST00000206270 674 ntBASIC16.85■□□□□ 0.29
Ercc2O08811 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.85■□□□□ 0.29
Ercc2O08811 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Ercc2O08811 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ercc2O08811 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Ercc2O08811 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
Ercc2O08811 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ercc2O08811 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ercc2O08811 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ercc2O08811 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.84■□□□□ 0.29
Ercc2O08811 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.84■□□□□ 0.29
Ercc2O08811 Mir770-201ENSMUST00000103252 94 ntBASIC16.84■□□□□ 0.29
Ercc2O08811 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.84■□□□□ 0.29
Ercc2O08811 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.84■□□□□ 0.29
Ercc2O08811 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ercc2O08811 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ercc2O08811 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ercc2O08811 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ercc2O08811 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ercc2O08811 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ercc2O08811 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ercc2O08811 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ercc2O08811 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Ercc2O08811 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ercc2O08811 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ercc2O08811 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ercc2O08811 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ercc2O08811 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ercc2O08811 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.84■□□□□ 0.29
Ercc2O08811 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.84■□□□□ 0.29
Ercc2O08811 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ercc2O08811 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ercc2O08811 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ercc2O08811 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Ercc2O08811 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ercc2O08811 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ercc2O08811 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ercc2O08811 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.83■□□□□ 0.28
Ercc2O08811 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ercc2O08811 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.83■□□□□ 0.28
Ercc2O08811 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
Ercc2O08811 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ercc2O08811 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ercc2O08811 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.83■□□□□ 0.28
Ercc2O08811 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ercc2O08811 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ercc2O08811 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Ercc2O08811 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ercc2O08811 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ercc2O08811 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ercc2O08811 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ercc2O08811 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ercc2O08811 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ercc2O08811 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ercc2O08811 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ercc2O08811 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ercc2O08811 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ercc2O08811 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.82■□□□□ 0.28
Ercc2O08811 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.82■□□□□ 0.28
Ercc2O08811 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ercc2O08811 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.82■□□□□ 0.28
Ercc2O08811 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ercc2O08811 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ercc2O08811 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Ercc2O08811 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Ercc2O08811 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ercc2O08811 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ercc2O08811 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ercc2O08811 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ercc2O08811 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ercc2O08811 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.81■□□□□ 0.28
Ercc2O08811 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ercc2O08811 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ercc2O08811 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ercc2O08811 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ercc2O08811 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.81■□□□□ 0.28
Ercc2O08811 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ercc2O08811 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ercc2O08811 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.81■□□□□ 0.28
Ercc2O08811 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ercc2O08811 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ercc2O08811 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ercc2O08811 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ercc2O08811 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ercc2O08811 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms