Protein–RNA interactions for Protein: O08740

Polr2j, DNA-directed RNA polymerase II subunit RPB11, mousemouse

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2jO08740 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Polr2jO08740 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Polr2jO08740 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Polr2jO08740 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Polr2jO08740 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Polr2jO08740 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Polr2jO08740 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Polr2jO08740 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Polr2jO08740 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Polr2jO08740 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Polr2jO08740 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Polr2jO08740 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Polr2jO08740 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Polr2jO08740 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Polr2jO08740 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Polr2jO08740 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Polr2jO08740 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Polr2jO08740 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
Polr2jO08740 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.81■□□□□ 0.12
Polr2jO08740 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Polr2jO08740 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Polr2jO08740 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Polr2jO08740 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Polr2jO08740 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Polr2jO08740 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Polr2jO08740 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Polr2jO08740 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Polr2jO08740 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Polr2jO08740 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Polr2jO08740 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Polr2jO08740 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Polr2jO08740 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Polr2jO08740 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Polr2jO08740 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Polr2jO08740 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Polr2jO08740 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Polr2jO08740 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Polr2jO08740 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Polr2jO08740 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Polr2jO08740 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Polr2jO08740 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Polr2jO08740 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Polr2jO08740 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Polr2jO08740 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Polr2jO08740 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Polr2jO08740 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Polr2jO08740 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Polr2jO08740 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Polr2jO08740 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Polr2jO08740 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Polr2jO08740 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Polr2jO08740 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Polr2jO08740 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC15.79■□□□□ 0.12
Polr2jO08740 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC15.79■□□□□ 0.12
Polr2jO08740 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Polr2jO08740 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Polr2jO08740 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Polr2jO08740 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Polr2jO08740 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Polr2jO08740 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Polr2jO08740 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Polr2jO08740 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Polr2jO08740 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Polr2jO08740 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Polr2jO08740 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Polr2jO08740 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC15.78■□□□□ 0.12
Polr2jO08740 Gm7791-201ENSMUST00000219066 539 ntBASIC15.78■□□□□ 0.12
Polr2jO08740 AC175538.1-201ENSMUST00000225343 1269 ntBASIC15.78■□□□□ 0.12
Polr2jO08740 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Polr2jO08740 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Polr2jO08740 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.78■□□□□ 0.12
Polr2jO08740 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Polr2jO08740 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Polr2jO08740 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Polr2jO08740 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Polr2jO08740 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Polr2jO08740 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Polr2jO08740 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.78■□□□□ 0.12
Polr2jO08740 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.78■□□□□ 0.12
Polr2jO08740 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Polr2jO08740 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Polr2jO08740 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Polr2jO08740 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC15.77■□□□□ 0.12
Polr2jO08740 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Polr2jO08740 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.77■□□□□ 0.12
Polr2jO08740 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.77■□□□□ 0.12
Polr2jO08740 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.77■□□□□ 0.12
Polr2jO08740 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.77■□□□□ 0.12
Polr2jO08740 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Polr2jO08740 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Polr2jO08740 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC15.77■□□□□ 0.12
Polr2jO08740 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.77■□□□□ 0.12
Polr2jO08740 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Polr2jO08740 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.77■□□□□ 0.12
Polr2jO08740 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Polr2jO08740 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC15.77■□□□□ 0.12
Polr2jO08740 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Polr2jO08740 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Polr2jO08740 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Polr2jO08740 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms